Gene : Lsat_1_v5_gn_4_2821 L. sativa V8
Defline:  (1 of 1) KOG3212 - Uncharacterized conserved protein related to IojAP Genomic Order:  89
Name:  ? Lsat_1_v5_gn_4_2821 Secondary Identifier:  ? PAC:38932936
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_2821 0.5kb upstream 0.5kb upstream 1700   true Lsat_1_v8_lg_4: 4462756-4464455 Lactuca sativa
Lsat_1_v5_gn_4_2821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 4463956-4464455 Lactuca sativa
Lsat_1_v5_gn_4_2821 0.5kb downstream 0.5kb downstream 1700   true Lsat_1_v8_lg_4: 4462256-4463955 Lactuca sativa
Lsat_1_v5_gn_4_2821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 4462256-4462755 Lactuca sativa
Lsat_1_v5_gn_4_2821 1.0kb upstream 1.0kb upstream 2200   true Lsat_1_v8_lg_4: 4462756-4464955 Lactuca sativa
Lsat_1_v5_gn_4_2821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 4463956-4464955 Lactuca sativa
Lsat_1_v5_gn_4_2821 1.0kb downstream 1.0kb downstream 2200   true Lsat_1_v8_lg_4: 4461756-4463955 Lactuca sativa
Lsat_1_v5_gn_4_2821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 4461756-4462755 Lactuca sativa
Lsat_1_v5_gn_4_2821 2.0kb upstream 2.0kb upstream 3200   true Lsat_1_v8_lg_4: 4462756-4465955 Lactuca sativa
Lsat_1_v5_gn_4_2821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 4463956-4465955 Lactuca sativa
Lsat_1_v5_gn_4_2821 2.0kb downstream 2.0kb downstream 3200   true Lsat_1_v8_lg_4: 4460756-4463955 Lactuca sativa
Lsat_1_v5_gn_4_2821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 4460756-4462755 Lactuca sativa
Lsat_1_v5_gn_4_2821 5.0kb upstream 5.0kb upstream 6200   true Lsat_1_v8_lg_4: 4462756-4468955 Lactuca sativa
Lsat_1_v5_gn_4_2821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 4463956-4468955 Lactuca sativa
Lsat_1_v5_gn_4_2821 5.0kb downstream 5.0kb downstream 6200   true Lsat_1_v8_lg_4: 4457756-4463955 Lactuca sativa
Lsat_1_v5_gn_4_2821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 4457756-4462755 Lactuca sativa
Lsat_1_v5_gn_4_2821 10.0kb upstream 10.0kb upstream 11200   true Lsat_1_v8_lg_4: 4462756-4473955 Lactuca sativa
Lsat_1_v5_gn_4_2821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 4463956-4473955 Lactuca sativa
Lsat_1_v5_gn_4_2821 10.0kb downstream 10.0kb downstream 11200   true Lsat_1_v8_lg_4: 4452756-4463955 Lactuca sativa
Lsat_1_v5_gn_4_2821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 4452756-4462755 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469411 5263 Asterids View MSA
123749362 5271 Pentapetalae View MSA
122773108 5272 Eudicot View MSA
122047007 5273 Angiosperm View MSA
121349437 5274 Embryophyte View MSA
123381310 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain