Gene : Lsat_1_v5_gn_4_31980 L. sativa V8
Defline:  (1 of 2) PTHR10509:SF17 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE DOMAIN-CONTAINING PROTEIN Genomic Order:  910
Name:  ? Lsat_1_v5_gn_4_31980 Secondary Identifier:  ? PAC:38932990
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_31980 0.5kb upstream 0.5kb upstream 2030   true Lsat_1_v8_lg_4: 44969404-44971433 Lactuca sativa
Lsat_1_v5_gn_4_31980 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 44969404-44969903 Lactuca sativa
Lsat_1_v5_gn_4_31980 0.5kb downstream 0.5kb downstream 2030   true Lsat_1_v8_lg_4: 44969904-44971933 Lactuca sativa
Lsat_1_v5_gn_4_31980 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 44971434-44971933 Lactuca sativa
Lsat_1_v5_gn_4_31980 1.0kb upstream 1.0kb upstream 2530   true Lsat_1_v8_lg_4: 44968904-44971433 Lactuca sativa
Lsat_1_v5_gn_4_31980 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 44968904-44969903 Lactuca sativa
Lsat_1_v5_gn_4_31980 1.0kb downstream 1.0kb downstream 2530   true Lsat_1_v8_lg_4: 44969904-44972433 Lactuca sativa
Lsat_1_v5_gn_4_31980 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 44971434-44972433 Lactuca sativa
Lsat_1_v5_gn_4_31980 2.0kb upstream 2.0kb upstream 3530   true Lsat_1_v8_lg_4: 44967904-44971433 Lactuca sativa
Lsat_1_v5_gn_4_31980 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 44967904-44969903 Lactuca sativa
Lsat_1_v5_gn_4_31980 2.0kb downstream 2.0kb downstream 3530   true Lsat_1_v8_lg_4: 44969904-44973433 Lactuca sativa
Lsat_1_v5_gn_4_31980 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 44971434-44973433 Lactuca sativa
Lsat_1_v5_gn_4_31980 5.0kb upstream 5.0kb upstream 6530   true Lsat_1_v8_lg_4: 44964904-44971433 Lactuca sativa
Lsat_1_v5_gn_4_31980 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 44964904-44969903 Lactuca sativa
Lsat_1_v5_gn_4_31980 5.0kb downstream 5.0kb downstream 6530   true Lsat_1_v8_lg_4: 44969904-44976433 Lactuca sativa
Lsat_1_v5_gn_4_31980 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 44971434-44976433 Lactuca sativa
Lsat_1_v5_gn_4_31980 10.0kb upstream 10.0kb upstream 11530   true Lsat_1_v8_lg_4: 44959904-44971433 Lactuca sativa
Lsat_1_v5_gn_4_31980 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 44959904-44969903 Lactuca sativa
Lsat_1_v5_gn_4_31980 10.0kb downstream 10.0kb downstream 11530   true Lsat_1_v8_lg_4: 44969904-44981433 Lactuca sativa
Lsat_1_v5_gn_4_31980 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 44971434-44981433 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468344 5263 Asterids View MSA
123737466 5271 Pentapetalae View MSA
122769892 5272 Eudicot View MSA
122044959 5273 Angiosperm View MSA
121347042 5274 Embryophyte View MSA
123380486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain