Gene : Lsat_1_v5_gn_4_31180 L. sativa V8
Defline:  (1 of 1) K00559 - sterol 24-C-methyltransferase (E2.1.1.41, SMT1, ERG6) Genomic Order:  921
Name:  ? Lsat_1_v5_gn_4_31180 Secondary Identifier:  ? PAC:38928532
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-2541 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_31180 0.5kb upstream 0.5kb upstream 3631   true Lsat_1_v8_lg_4: 45827062-45830692 Lactuca sativa
Lsat_1_v5_gn_4_31180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 45827062-45827561 Lactuca sativa
Lsat_1_v5_gn_4_31180 0.5kb downstream 0.5kb downstream 3631   true Lsat_1_v8_lg_4: 45827562-45831192 Lactuca sativa
Lsat_1_v5_gn_4_31180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 45830693-45831192 Lactuca sativa
Lsat_1_v5_gn_4_31180 1.0kb upstream 1.0kb upstream 4131   true Lsat_1_v8_lg_4: 45826562-45830692 Lactuca sativa
Lsat_1_v5_gn_4_31180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 45826562-45827561 Lactuca sativa
Lsat_1_v5_gn_4_31180 1.0kb downstream 1.0kb downstream 4131   true Lsat_1_v8_lg_4: 45827562-45831692 Lactuca sativa
Lsat_1_v5_gn_4_31180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 45830693-45831692 Lactuca sativa
Lsat_1_v5_gn_4_31180 2.0kb upstream 2.0kb upstream 5131   true Lsat_1_v8_lg_4: 45825562-45830692 Lactuca sativa
Lsat_1_v5_gn_4_31180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 45825562-45827561 Lactuca sativa
Lsat_1_v5_gn_4_31180 2.0kb downstream 2.0kb downstream 5131   true Lsat_1_v8_lg_4: 45827562-45832692 Lactuca sativa
Lsat_1_v5_gn_4_31180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 45830693-45832692 Lactuca sativa
Lsat_1_v5_gn_4_31180 5.0kb upstream 5.0kb upstream 8131   true Lsat_1_v8_lg_4: 45822562-45830692 Lactuca sativa
Lsat_1_v5_gn_4_31180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 45822562-45827561 Lactuca sativa
Lsat_1_v5_gn_4_31180 5.0kb downstream 5.0kb downstream 8131   true Lsat_1_v8_lg_4: 45827562-45835692 Lactuca sativa
Lsat_1_v5_gn_4_31180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 45830693-45835692 Lactuca sativa
Lsat_1_v5_gn_4_31180 10.0kb upstream 10.0kb upstream 13131   true Lsat_1_v8_lg_4: 45817562-45830692 Lactuca sativa
Lsat_1_v5_gn_4_31180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 45817562-45827561 Lactuca sativa
Lsat_1_v5_gn_4_31180 10.0kb downstream 10.0kb downstream 13131   true Lsat_1_v8_lg_4: 45827562-45840692 Lactuca sativa
Lsat_1_v5_gn_4_31180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 45830693-45840692 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041479 5273 Angiosperm View MSA
121476851 5263 Asterids View MSA
123743908 5271 Pentapetalae View MSA
122793455 5272 Eudicot View MSA
121345470 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain