Gene : Lsat_1_v5_gn_4_31520 L. sativa V8
Defline:  (1 of 1) K11159 - carotenoid cleavage dioxygenase (K11159) Genomic Order:  930
Name:  ? Lsat_1_v5_gn_4_31520 Secondary Identifier:  ? PAC:38934035
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_31520 0.5kb upstream 0.5kb upstream 4467   true Lsat_1_v8_lg_4: 46265420-46269886 Lactuca sativa
Lsat_1_v5_gn_4_31520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 46265420-46265919 Lactuca sativa
Lsat_1_v5_gn_4_31520 0.5kb downstream 0.5kb downstream 4467   true Lsat_1_v8_lg_4: 46265920-46270386 Lactuca sativa
Lsat_1_v5_gn_4_31520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 46269887-46270386 Lactuca sativa
Lsat_1_v5_gn_4_31520 1.0kb upstream 1.0kb upstream 4967   true Lsat_1_v8_lg_4: 46264920-46269886 Lactuca sativa
Lsat_1_v5_gn_4_31520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 46264920-46265919 Lactuca sativa
Lsat_1_v5_gn_4_31520 1.0kb downstream 1.0kb downstream 4967   true Lsat_1_v8_lg_4: 46265920-46270886 Lactuca sativa
Lsat_1_v5_gn_4_31520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 46269887-46270886 Lactuca sativa
Lsat_1_v5_gn_4_31520 2.0kb upstream 2.0kb upstream 5967   true Lsat_1_v8_lg_4: 46263920-46269886 Lactuca sativa
Lsat_1_v5_gn_4_31520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 46263920-46265919 Lactuca sativa
Lsat_1_v5_gn_4_31520 2.0kb downstream 2.0kb downstream 5967   true Lsat_1_v8_lg_4: 46265920-46271886 Lactuca sativa
Lsat_1_v5_gn_4_31520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 46269887-46271886 Lactuca sativa
Lsat_1_v5_gn_4_31520 5.0kb upstream 5.0kb upstream 8967   true Lsat_1_v8_lg_4: 46260920-46269886 Lactuca sativa
Lsat_1_v5_gn_4_31520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 46260920-46265919 Lactuca sativa
Lsat_1_v5_gn_4_31520 5.0kb downstream 5.0kb downstream 8967   true Lsat_1_v8_lg_4: 46265920-46274886 Lactuca sativa
Lsat_1_v5_gn_4_31520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 46269887-46274886 Lactuca sativa
Lsat_1_v5_gn_4_31520 10.0kb upstream 10.0kb upstream 13967   true Lsat_1_v8_lg_4: 46255920-46269886 Lactuca sativa
Lsat_1_v5_gn_4_31520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 46255920-46265919 Lactuca sativa
Lsat_1_v5_gn_4_31520 10.0kb downstream 10.0kb downstream 13967   true Lsat_1_v8_lg_4: 46265920-46279886 Lactuca sativa
Lsat_1_v5_gn_4_31520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 46269887-46279886 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467874 5263 Asterids View MSA
123749061 5271 Pentapetalae View MSA
122787138 5272 Eudicot View MSA
122045403 5273 Angiosperm View MSA
121350265 5274 Embryophyte View MSA
123428777 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain