Gene : Lsat_1_v5_gn_4_35281 L. sativa V8
Defline:  (1 of 6) PF07714//PF13947 - Protein tyrosine kinase (Pkinase_Tyr) // Wall-associated receptor kinase galacturonan-binding (GUB_WAK_bind) Genomic Order:  1033
Name:  ? Lsat_1_v5_gn_4_35281 Secondary Identifier:  ? PAC:38932812
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_35281 0.5kb upstream 0.5kb upstream 3209   true Lsat_1_v8_lg_4: 51599569-51602777 Lactuca sativa
Lsat_1_v5_gn_4_35281 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 51602278-51602777 Lactuca sativa
Lsat_1_v5_gn_4_35281 0.5kb downstream 0.5kb downstream 3209   true Lsat_1_v8_lg_4: 51599069-51602277 Lactuca sativa
Lsat_1_v5_gn_4_35281 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 51599069-51599568 Lactuca sativa
Lsat_1_v5_gn_4_35281 1.0kb upstream 1.0kb upstream 3709   true Lsat_1_v8_lg_4: 51599569-51603277 Lactuca sativa
Lsat_1_v5_gn_4_35281 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 51602278-51603277 Lactuca sativa
Lsat_1_v5_gn_4_35281 1.0kb downstream 1.0kb downstream 3709   true Lsat_1_v8_lg_4: 51598569-51602277 Lactuca sativa
Lsat_1_v5_gn_4_35281 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 51598569-51599568 Lactuca sativa
Lsat_1_v5_gn_4_35281 2.0kb upstream 2.0kb upstream 4709   true Lsat_1_v8_lg_4: 51599569-51604277 Lactuca sativa
Lsat_1_v5_gn_4_35281 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 51602278-51604277 Lactuca sativa
Lsat_1_v5_gn_4_35281 2.0kb downstream 2.0kb downstream 4709   true Lsat_1_v8_lg_4: 51597569-51602277 Lactuca sativa
Lsat_1_v5_gn_4_35281 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 51597569-51599568 Lactuca sativa
Lsat_1_v5_gn_4_35281 5.0kb upstream 5.0kb upstream 7709   true Lsat_1_v8_lg_4: 51599569-51607277 Lactuca sativa
Lsat_1_v5_gn_4_35281 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 51602278-51607277 Lactuca sativa
Lsat_1_v5_gn_4_35281 5.0kb downstream 5.0kb downstream 7709   true Lsat_1_v8_lg_4: 51594569-51602277 Lactuca sativa
Lsat_1_v5_gn_4_35281 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 51594569-51599568 Lactuca sativa
Lsat_1_v5_gn_4_35281 10.0kb upstream 10.0kb upstream 12709   true Lsat_1_v8_lg_4: 51599569-51612277 Lactuca sativa
Lsat_1_v5_gn_4_35281 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 51602278-51612277 Lactuca sativa
Lsat_1_v5_gn_4_35281 10.0kb downstream 10.0kb downstream 12709   true Lsat_1_v8_lg_4: 51589569-51602277 Lactuca sativa
Lsat_1_v5_gn_4_35281 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 51589569-51599568 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041477 5273 Angiosperm View MSA
121468879 5263 Asterids View MSA
123737754 5271 Pentapetalae View MSA
122789456 5272 Eudicot View MSA
121309854 5274 Embryophyte View MSA
123347499 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain