Gene : Lsat_1_v5_gn_4_35260 L. sativa V8
Defline:  (1 of 1) 2.1.2.11 - 3-methyl-2-oxobutanoate hydroxymethyltransferase / Ketopantoate hydroxymethyltransferase Genomic Order:  1032
Name:  ? Lsat_1_v5_gn_4_35260 Secondary Identifier:  ? PAC:38935337
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PANTO-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_35260 0.5kb upstream 0.5kb upstream 2326   true Lsat_1_v8_lg_4: 51597174-51599499 Lactuca sativa
Lsat_1_v5_gn_4_35260 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 51597174-51597673 Lactuca sativa
Lsat_1_v5_gn_4_35260 0.5kb downstream 0.5kb downstream 2326   true Lsat_1_v8_lg_4: 51597674-51599999 Lactuca sativa
Lsat_1_v5_gn_4_35260 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 51599500-51599999 Lactuca sativa
Lsat_1_v5_gn_4_35260 1.0kb upstream 1.0kb upstream 2826   true Lsat_1_v8_lg_4: 51596674-51599499 Lactuca sativa
Lsat_1_v5_gn_4_35260 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 51596674-51597673 Lactuca sativa
Lsat_1_v5_gn_4_35260 1.0kb downstream 1.0kb downstream 2826   true Lsat_1_v8_lg_4: 51597674-51600499 Lactuca sativa
Lsat_1_v5_gn_4_35260 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 51599500-51600499 Lactuca sativa
Lsat_1_v5_gn_4_35260 2.0kb upstream 2.0kb upstream 3826   true Lsat_1_v8_lg_4: 51595674-51599499 Lactuca sativa
Lsat_1_v5_gn_4_35260 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 51595674-51597673 Lactuca sativa
Lsat_1_v5_gn_4_35260 2.0kb downstream 2.0kb downstream 3826   true Lsat_1_v8_lg_4: 51597674-51601499 Lactuca sativa
Lsat_1_v5_gn_4_35260 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 51599500-51601499 Lactuca sativa
Lsat_1_v5_gn_4_35260 5.0kb upstream 5.0kb upstream 6826   true Lsat_1_v8_lg_4: 51592674-51599499 Lactuca sativa
Lsat_1_v5_gn_4_35260 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 51592674-51597673 Lactuca sativa
Lsat_1_v5_gn_4_35260 5.0kb downstream 5.0kb downstream 6826   true Lsat_1_v8_lg_4: 51597674-51604499 Lactuca sativa
Lsat_1_v5_gn_4_35260 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 51599500-51604499 Lactuca sativa
Lsat_1_v5_gn_4_35260 10.0kb upstream 10.0kb upstream 11826   true Lsat_1_v8_lg_4: 51587674-51599499 Lactuca sativa
Lsat_1_v5_gn_4_35260 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 51587674-51597673 Lactuca sativa
Lsat_1_v5_gn_4_35260 10.0kb downstream 10.0kb downstream 11826   true Lsat_1_v8_lg_4: 51597674-51609499 Lactuca sativa
Lsat_1_v5_gn_4_35260 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 51599500-51609499 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467164 5263 Asterids View MSA
123736873 5271 Pentapetalae View MSA
122793216 5272 Eudicot View MSA
122047605 5273 Angiosperm View MSA
121346037 5274 Embryophyte View MSA
123424122 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain