Gene : Lsat_1_v5_gn_4_35101 L. sativa V8
Defline:  (1 of 2) PTHR31852//PTHR31852:SF6 - FAMILY NOT NAMED // LATE EMBRYOGENESIS ABUNDANT HYDROXYPROLINE-RICH GLYCOPROTEIN Genomic Order:  1026
Name:  ? Lsat_1_v5_gn_4_35101 Secondary Identifier:  ? PAC:38933752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_35101 0.5kb upstream 0.5kb upstream 1338   true Lsat_1_v8_lg_4: 51463442-51464779 Lactuca sativa
Lsat_1_v5_gn_4_35101 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 51464280-51464779 Lactuca sativa
Lsat_1_v5_gn_4_35101 0.5kb downstream 0.5kb downstream 1338   true Lsat_1_v8_lg_4: 51462942-51464279 Lactuca sativa
Lsat_1_v5_gn_4_35101 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 51462942-51463441 Lactuca sativa
Lsat_1_v5_gn_4_35101 1.0kb upstream 1.0kb upstream 1838   true Lsat_1_v8_lg_4: 51463442-51465279 Lactuca sativa
Lsat_1_v5_gn_4_35101 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 51464280-51465279 Lactuca sativa
Lsat_1_v5_gn_4_35101 1.0kb downstream 1.0kb downstream 1838   true Lsat_1_v8_lg_4: 51462442-51464279 Lactuca sativa
Lsat_1_v5_gn_4_35101 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 51462442-51463441 Lactuca sativa
Lsat_1_v5_gn_4_35101 2.0kb upstream 2.0kb upstream 2838   true Lsat_1_v8_lg_4: 51463442-51466279 Lactuca sativa
Lsat_1_v5_gn_4_35101 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 51464280-51466279 Lactuca sativa
Lsat_1_v5_gn_4_35101 2.0kb downstream 2.0kb downstream 2838   true Lsat_1_v8_lg_4: 51461442-51464279 Lactuca sativa
Lsat_1_v5_gn_4_35101 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 51461442-51463441 Lactuca sativa
Lsat_1_v5_gn_4_35101 5.0kb upstream 5.0kb upstream 5838   true Lsat_1_v8_lg_4: 51463442-51469279 Lactuca sativa
Lsat_1_v5_gn_4_35101 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 51464280-51469279 Lactuca sativa
Lsat_1_v5_gn_4_35101 5.0kb downstream 5.0kb downstream 5838   true Lsat_1_v8_lg_4: 51458442-51464279 Lactuca sativa
Lsat_1_v5_gn_4_35101 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 51458442-51463441 Lactuca sativa
Lsat_1_v5_gn_4_35101 10.0kb upstream 10.0kb upstream 10838   true Lsat_1_v8_lg_4: 51463442-51474279 Lactuca sativa
Lsat_1_v5_gn_4_35101 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 51464280-51474279 Lactuca sativa
Lsat_1_v5_gn_4_35101 10.0kb downstream 10.0kb downstream 10838   true Lsat_1_v8_lg_4: 51453442-51464279 Lactuca sativa
Lsat_1_v5_gn_4_35101 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 51453442-51463441 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471415 5263 Asterids View MSA
123748410 5271 Pentapetalae View MSA
122786143 5272 Eudicot View MSA
122049772 5273 Angiosperm View MSA
121350992 5274 Embryophyte View MSA
123381962 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain