Gene : Lsat_1_v5_gn_4_38381 L. sativa V8
Defline:  (1 of 200) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1141
Name:  ? Lsat_1_v5_gn_4_38381 Secondary Identifier:  ? PAC:38934932
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_38381 0.5kb upstream 0.5kb upstream 4865   true Lsat_1_v8_lg_4: 57368461-57373325 Lactuca sativa
Lsat_1_v5_gn_4_38381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 57372826-57373325 Lactuca sativa
Lsat_1_v5_gn_4_38381 0.5kb downstream 0.5kb downstream 4865   true Lsat_1_v8_lg_4: 57367961-57372825 Lactuca sativa
Lsat_1_v5_gn_4_38381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 57367961-57368460 Lactuca sativa
Lsat_1_v5_gn_4_38381 1.0kb upstream 1.0kb upstream 5365   true Lsat_1_v8_lg_4: 57368461-57373825 Lactuca sativa
Lsat_1_v5_gn_4_38381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 57372826-57373825 Lactuca sativa
Lsat_1_v5_gn_4_38381 1.0kb downstream 1.0kb downstream 5365   true Lsat_1_v8_lg_4: 57367461-57372825 Lactuca sativa
Lsat_1_v5_gn_4_38381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 57367461-57368460 Lactuca sativa
Lsat_1_v5_gn_4_38381 2.0kb upstream 2.0kb upstream 6365   true Lsat_1_v8_lg_4: 57368461-57374825 Lactuca sativa
Lsat_1_v5_gn_4_38381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 57372826-57374825 Lactuca sativa
Lsat_1_v5_gn_4_38381 2.0kb downstream 2.0kb downstream 6365   true Lsat_1_v8_lg_4: 57366461-57372825 Lactuca sativa
Lsat_1_v5_gn_4_38381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 57366461-57368460 Lactuca sativa
Lsat_1_v5_gn_4_38381 5.0kb upstream 5.0kb upstream 9365   true Lsat_1_v8_lg_4: 57368461-57377825 Lactuca sativa
Lsat_1_v5_gn_4_38381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 57372826-57377825 Lactuca sativa
Lsat_1_v5_gn_4_38381 5.0kb downstream 5.0kb downstream 9365   true Lsat_1_v8_lg_4: 57363461-57372825 Lactuca sativa
Lsat_1_v5_gn_4_38381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 57363461-57368460 Lactuca sativa
Lsat_1_v5_gn_4_38381 10.0kb upstream 10.0kb upstream 14365   true Lsat_1_v8_lg_4: 57368461-57382825 Lactuca sativa
Lsat_1_v5_gn_4_38381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 57372826-57382825 Lactuca sativa
Lsat_1_v5_gn_4_38381 10.0kb downstream 10.0kb downstream 14365   true Lsat_1_v8_lg_4: 57358461-57372825 Lactuca sativa
Lsat_1_v5_gn_4_38381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 57358461-57368460 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474051 5263 Asterids View MSA
123747473 5271 Pentapetalae View MSA
122794645 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain