Gene : Lsat_1_v5_gn_4_98021 L. sativa V8
Defline:  (1 of 50) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2827
Name:  ? Lsat_1_v5_gn_4_98021 Secondary Identifier:  ? PAC:38929716
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_98021 0.5kb upstream 0.5kb upstream 8293   true Lsat_1_v8_lg_4: 162599449-162607741 Lactuca sativa
Lsat_1_v5_gn_4_98021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 162599449-162599948 Lactuca sativa
Lsat_1_v5_gn_4_98021 0.5kb downstream 0.5kb downstream 8293   true Lsat_1_v8_lg_4: 162599949-162608241 Lactuca sativa
Lsat_1_v5_gn_4_98021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 162607742-162608241 Lactuca sativa
Lsat_1_v5_gn_4_98021 1.0kb upstream 1.0kb upstream 8793   true Lsat_1_v8_lg_4: 162598949-162607741 Lactuca sativa
Lsat_1_v5_gn_4_98021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 162598949-162599948 Lactuca sativa
Lsat_1_v5_gn_4_98021 1.0kb downstream 1.0kb downstream 8793   true Lsat_1_v8_lg_4: 162599949-162608741 Lactuca sativa
Lsat_1_v5_gn_4_98021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 162607742-162608741 Lactuca sativa
Lsat_1_v5_gn_4_98021 2.0kb upstream 2.0kb upstream 9793   true Lsat_1_v8_lg_4: 162597949-162607741 Lactuca sativa
Lsat_1_v5_gn_4_98021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 162597949-162599948 Lactuca sativa
Lsat_1_v5_gn_4_98021 2.0kb downstream 2.0kb downstream 9793   true Lsat_1_v8_lg_4: 162599949-162609741 Lactuca sativa
Lsat_1_v5_gn_4_98021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 162607742-162609741 Lactuca sativa
Lsat_1_v5_gn_4_98021 5.0kb upstream 5.0kb upstream 12793   true Lsat_1_v8_lg_4: 162594949-162607741 Lactuca sativa
Lsat_1_v5_gn_4_98021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 162594949-162599948 Lactuca sativa
Lsat_1_v5_gn_4_98021 5.0kb downstream 5.0kb downstream 12793   true Lsat_1_v8_lg_4: 162599949-162612741 Lactuca sativa
Lsat_1_v5_gn_4_98021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 162607742-162612741 Lactuca sativa
Lsat_1_v5_gn_4_98021 10.0kb upstream 10.0kb upstream 17793   true Lsat_1_v8_lg_4: 162589949-162607741 Lactuca sativa
Lsat_1_v5_gn_4_98021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 162589949-162599948 Lactuca sativa
Lsat_1_v5_gn_4_98021 10.0kb downstream 10.0kb downstream 17793   true Lsat_1_v8_lg_4: 162599949-162617741 Lactuca sativa
Lsat_1_v5_gn_4_98021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 162607742-162617741 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472904 5263 Asterids View MSA
123739783 5271 Pentapetalae View MSA
122791645 5272 Eudicot View MSA
122041926 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain