Gene : Lsat_1_v5_gn_6_37041 L. sativa V8
Defline:  (1 of 3) PTHR10366//PTHR10366:SF332 - NAD DEPENDENT EPIMERASE/DEHYDRATASE // SUBFAMILY NOT NAMED Genomic Order:  904
Name:  ? Lsat_1_v5_gn_6_37041 Secondary Identifier:  ? PAC:38929585
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-361 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_6_37041 0.5kb upstream 0.5kb upstream 2657   true Lsat_1_v8_lg_4: 44882087-44884743 Lactuca sativa
Lsat_1_v5_gn_6_37041 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 44882087-44882586 Lactuca sativa
Lsat_1_v5_gn_6_37041 0.5kb downstream 0.5kb downstream 2657   true Lsat_1_v8_lg_4: 44882587-44885243 Lactuca sativa
Lsat_1_v5_gn_6_37041 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 44884744-44885243 Lactuca sativa
Lsat_1_v5_gn_6_37041 1.0kb upstream 1.0kb upstream 3157   true Lsat_1_v8_lg_4: 44881587-44884743 Lactuca sativa
Lsat_1_v5_gn_6_37041 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 44881587-44882586 Lactuca sativa
Lsat_1_v5_gn_6_37041 1.0kb downstream 1.0kb downstream 3157   true Lsat_1_v8_lg_4: 44882587-44885743 Lactuca sativa
Lsat_1_v5_gn_6_37041 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 44884744-44885743 Lactuca sativa
Lsat_1_v5_gn_6_37041 2.0kb upstream 2.0kb upstream 4157   true Lsat_1_v8_lg_4: 44880587-44884743 Lactuca sativa
Lsat_1_v5_gn_6_37041 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 44880587-44882586 Lactuca sativa
Lsat_1_v5_gn_6_37041 2.0kb downstream 2.0kb downstream 4157   true Lsat_1_v8_lg_4: 44882587-44886743 Lactuca sativa
Lsat_1_v5_gn_6_37041 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 44884744-44886743 Lactuca sativa
Lsat_1_v5_gn_6_37041 5.0kb upstream 5.0kb upstream 7157   true Lsat_1_v8_lg_4: 44877587-44884743 Lactuca sativa
Lsat_1_v5_gn_6_37041 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 44877587-44882586 Lactuca sativa
Lsat_1_v5_gn_6_37041 5.0kb downstream 5.0kb downstream 7157   true Lsat_1_v8_lg_4: 44882587-44889743 Lactuca sativa
Lsat_1_v5_gn_6_37041 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 44884744-44889743 Lactuca sativa
Lsat_1_v5_gn_6_37041 10.0kb upstream 10.0kb upstream 12157   true Lsat_1_v8_lg_4: 44872587-44884743 Lactuca sativa
Lsat_1_v5_gn_6_37041 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 44872587-44882586 Lactuca sativa
Lsat_1_v5_gn_6_37041 10.0kb downstream 10.0kb downstream 12157   true Lsat_1_v8_lg_4: 44882587-44894743 Lactuca sativa
Lsat_1_v5_gn_6_37041 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 44884744-44894743 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466716 5263 Asterids View MSA
123749871 5271 Pentapetalae View MSA
122798457 5272 Eudicot View MSA
122050735 5273 Angiosperm View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain