Gene : Lsat_1_v5_gn_5_102820 L. sativa V8
Defline:  (1 of 1) K12848 - U4/U6.U5 tri-snRNP component SNU23 (SNU23) Genomic Order:  2677
Name:  ? Lsat_1_v5_gn_5_102820 Secondary Identifier:  ? PAC:38964242
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_102820 0.5kb upstream 0.5kb upstream 3633   true Lsat_1_v8_lg_5: 220856786-220860418 Lactuca sativa
Lsat_1_v5_gn_5_102820 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 220859919-220860418 Lactuca sativa
Lsat_1_v5_gn_5_102820 0.5kb downstream 0.5kb downstream 3633   true Lsat_1_v8_lg_5: 220856286-220859918 Lactuca sativa
Lsat_1_v5_gn_5_102820 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 220856286-220856785 Lactuca sativa
Lsat_1_v5_gn_5_102820 1.0kb upstream 1.0kb upstream 4133   true Lsat_1_v8_lg_5: 220856786-220860918 Lactuca sativa
Lsat_1_v5_gn_5_102820 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 220859919-220860918 Lactuca sativa
Lsat_1_v5_gn_5_102820 1.0kb downstream 1.0kb downstream 4133   true Lsat_1_v8_lg_5: 220855786-220859918 Lactuca sativa
Lsat_1_v5_gn_5_102820 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 220855786-220856785 Lactuca sativa
Lsat_1_v5_gn_5_102820 2.0kb upstream 2.0kb upstream 5133   true Lsat_1_v8_lg_5: 220856786-220861918 Lactuca sativa
Lsat_1_v5_gn_5_102820 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 220859919-220861918 Lactuca sativa
Lsat_1_v5_gn_5_102820 2.0kb downstream 2.0kb downstream 5133   true Lsat_1_v8_lg_5: 220854786-220859918 Lactuca sativa
Lsat_1_v5_gn_5_102820 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 220854786-220856785 Lactuca sativa
Lsat_1_v5_gn_5_102820 5.0kb upstream 5.0kb upstream 8133   true Lsat_1_v8_lg_5: 220856786-220864918 Lactuca sativa
Lsat_1_v5_gn_5_102820 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 220859919-220864918 Lactuca sativa
Lsat_1_v5_gn_5_102820 5.0kb downstream 5.0kb downstream 8133   true Lsat_1_v8_lg_5: 220851786-220859918 Lactuca sativa
Lsat_1_v5_gn_5_102820 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 220851786-220856785 Lactuca sativa
Lsat_1_v5_gn_5_102820 10.0kb upstream 10.0kb upstream 13133   true Lsat_1_v8_lg_5: 220856786-220869918 Lactuca sativa
Lsat_1_v5_gn_5_102820 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 220859919-220869918 Lactuca sativa
Lsat_1_v5_gn_5_102820 10.0kb downstream 10.0kb downstream 13133   true Lsat_1_v8_lg_5: 220846786-220859918 Lactuca sativa
Lsat_1_v5_gn_5_102820 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 220846786-220856785 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472814 5263 Asterids View MSA
123739727 5271 Pentapetalae View MSA
122792158 5272 Eudicot View MSA
122047848 5273 Angiosperm View MSA
121346040 5274 Embryophyte View MSA
123426715 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain