Gene : Lsat_1_v5_gn_4_73020 L. sativa V8
Defline:  (1 of 1) PTHR23079:SF5 - RNA-DEPENDENT RNA POLYMERASE 2 Genomic Order:  2202
Name:  ? Lsat_1_v5_gn_4_73020 Secondary Identifier:  ? PAC:38930978
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_73020 0.5kb upstream 0.5kb upstream 4700   true Lsat_1_v8_lg_4: 118636961-118641660 Lactuca sativa
Lsat_1_v5_gn_4_73020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 118636961-118637460 Lactuca sativa
Lsat_1_v5_gn_4_73020 0.5kb downstream 0.5kb downstream 4700   true Lsat_1_v8_lg_4: 118637461-118642160 Lactuca sativa
Lsat_1_v5_gn_4_73020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 118641661-118642160 Lactuca sativa
Lsat_1_v5_gn_4_73020 1.0kb upstream 1.0kb upstream 5200   true Lsat_1_v8_lg_4: 118636461-118641660 Lactuca sativa
Lsat_1_v5_gn_4_73020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 118636461-118637460 Lactuca sativa
Lsat_1_v5_gn_4_73020 1.0kb downstream 1.0kb downstream 5200   true Lsat_1_v8_lg_4: 118637461-118642660 Lactuca sativa
Lsat_1_v5_gn_4_73020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 118641661-118642660 Lactuca sativa
Lsat_1_v5_gn_4_73020 2.0kb upstream 2.0kb upstream 6200   true Lsat_1_v8_lg_4: 118635461-118641660 Lactuca sativa
Lsat_1_v5_gn_4_73020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 118635461-118637460 Lactuca sativa
Lsat_1_v5_gn_4_73020 2.0kb downstream 2.0kb downstream 6200   true Lsat_1_v8_lg_4: 118637461-118643660 Lactuca sativa
Lsat_1_v5_gn_4_73020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 118641661-118643660 Lactuca sativa
Lsat_1_v5_gn_4_73020 5.0kb upstream 5.0kb upstream 9200   true Lsat_1_v8_lg_4: 118632461-118641660 Lactuca sativa
Lsat_1_v5_gn_4_73020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 118632461-118637460 Lactuca sativa
Lsat_1_v5_gn_4_73020 5.0kb downstream 5.0kb downstream 9200   true Lsat_1_v8_lg_4: 118637461-118646660 Lactuca sativa
Lsat_1_v5_gn_4_73020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 118641661-118646660 Lactuca sativa
Lsat_1_v5_gn_4_73020 10.0kb upstream 10.0kb upstream 14200   true Lsat_1_v8_lg_4: 118627461-118641660 Lactuca sativa
Lsat_1_v5_gn_4_73020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 118627461-118637460 Lactuca sativa
Lsat_1_v5_gn_4_73020 10.0kb downstream 10.0kb downstream 14200   true Lsat_1_v8_lg_4: 118637461-118651660 Lactuca sativa
Lsat_1_v5_gn_4_73020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 118641661-118651660 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474006 5263 Asterids View MSA
123747025 5271 Pentapetalae View MSA
122788970 5272 Eudicot View MSA
122044390 5273 Angiosperm View MSA
121351040 5274 Embryophyte View MSA
123428546 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain