Gene : Lsat_1_v5_gn_4_75321 L. sativa V8
Defline:  (1 of 1) K03681 - exosome complex component RRP40 (RRP40, EXOSC3) Genomic Order:  2217
Name:  ? Lsat_1_v5_gn_4_75321 Secondary Identifier:  ? PAC:38930294
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_75321 0.5kb upstream 0.5kb upstream 3389   true Lsat_1_v8_lg_4: 119256456-119259844 Lactuca sativa
Lsat_1_v5_gn_4_75321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 119256456-119256955 Lactuca sativa
Lsat_1_v5_gn_4_75321 0.5kb downstream 0.5kb downstream 3389   true Lsat_1_v8_lg_4: 119256956-119260344 Lactuca sativa
Lsat_1_v5_gn_4_75321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 119259845-119260344 Lactuca sativa
Lsat_1_v5_gn_4_75321 1.0kb upstream 1.0kb upstream 3889   true Lsat_1_v8_lg_4: 119255956-119259844 Lactuca sativa
Lsat_1_v5_gn_4_75321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 119255956-119256955 Lactuca sativa
Lsat_1_v5_gn_4_75321 1.0kb downstream 1.0kb downstream 3889   true Lsat_1_v8_lg_4: 119256956-119260844 Lactuca sativa
Lsat_1_v5_gn_4_75321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 119259845-119260844 Lactuca sativa
Lsat_1_v5_gn_4_75321 2.0kb upstream 2.0kb upstream 4889   true Lsat_1_v8_lg_4: 119254956-119259844 Lactuca sativa
Lsat_1_v5_gn_4_75321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 119254956-119256955 Lactuca sativa
Lsat_1_v5_gn_4_75321 2.0kb downstream 2.0kb downstream 4889   true Lsat_1_v8_lg_4: 119256956-119261844 Lactuca sativa
Lsat_1_v5_gn_4_75321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 119259845-119261844 Lactuca sativa
Lsat_1_v5_gn_4_75321 5.0kb upstream 5.0kb upstream 7889   true Lsat_1_v8_lg_4: 119251956-119259844 Lactuca sativa
Lsat_1_v5_gn_4_75321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 119251956-119256955 Lactuca sativa
Lsat_1_v5_gn_4_75321 5.0kb downstream 5.0kb downstream 7889   true Lsat_1_v8_lg_4: 119256956-119264844 Lactuca sativa
Lsat_1_v5_gn_4_75321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 119259845-119264844 Lactuca sativa
Lsat_1_v5_gn_4_75321 10.0kb upstream 10.0kb upstream 12889   true Lsat_1_v8_lg_4: 119246956-119259844 Lactuca sativa
Lsat_1_v5_gn_4_75321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 119246956-119256955 Lactuca sativa
Lsat_1_v5_gn_4_75321 10.0kb downstream 10.0kb downstream 12889   true Lsat_1_v8_lg_4: 119256956-119269844 Lactuca sativa
Lsat_1_v5_gn_4_75321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 119259845-119269844 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466910 5263 Asterids View MSA
123736741 5271 Pentapetalae View MSA
122789639 5272 Eudicot View MSA
122045630 5273 Angiosperm View MSA
121344862 5274 Embryophyte View MSA
123428759 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain