Gene : Lsat_1_v5_gn_4_77861 L. sativa V8
Defline:  (1 of 6) K00134 - glyceraldehyde 3-phosphate dehydrogenase (GAPDH, gapA) Genomic Order:  2283
Name:  ? Lsat_1_v5_gn_4_77861 Secondary Identifier:  ? PAC:38930027
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa ANAEROFRUCAT-PWY Lactuca sativa pathologic  
Lsativa ANAGLYCOLYSIS-PWY Lactuca sativa pathologic  
Lsativa GLUCONEO-PWY Lactuca sativa pathologic  
Lsativa PWY-1042 Lactuca sativa pathologic  
Lsativa PWY-5464 Lactuca sativa pathologic  
Lsativa SUCSYN-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_77861 0.5kb upstream 0.5kb upstream 3160   true Lsat_1_v8_lg_4: 123481873-123485032 Lactuca sativa
Lsat_1_v5_gn_4_77861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 123481873-123482372 Lactuca sativa
Lsat_1_v5_gn_4_77861 0.5kb downstream 0.5kb downstream 3160   true Lsat_1_v8_lg_4: 123482373-123485532 Lactuca sativa
Lsat_1_v5_gn_4_77861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 123485033-123485532 Lactuca sativa
Lsat_1_v5_gn_4_77861 1.0kb upstream 1.0kb upstream 3660   true Lsat_1_v8_lg_4: 123481373-123485032 Lactuca sativa
Lsat_1_v5_gn_4_77861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 123481373-123482372 Lactuca sativa
Lsat_1_v5_gn_4_77861 1.0kb downstream 1.0kb downstream 3660   true Lsat_1_v8_lg_4: 123482373-123486032 Lactuca sativa
Lsat_1_v5_gn_4_77861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 123485033-123486032 Lactuca sativa
Lsat_1_v5_gn_4_77861 2.0kb upstream 2.0kb upstream 4660   true Lsat_1_v8_lg_4: 123480373-123485032 Lactuca sativa
Lsat_1_v5_gn_4_77861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 123480373-123482372 Lactuca sativa
Lsat_1_v5_gn_4_77861 2.0kb downstream 2.0kb downstream 4660   true Lsat_1_v8_lg_4: 123482373-123487032 Lactuca sativa
Lsat_1_v5_gn_4_77861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 123485033-123487032 Lactuca sativa
Lsat_1_v5_gn_4_77861 5.0kb upstream 5.0kb upstream 7660   true Lsat_1_v8_lg_4: 123477373-123485032 Lactuca sativa
Lsat_1_v5_gn_4_77861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 123477373-123482372 Lactuca sativa
Lsat_1_v5_gn_4_77861 5.0kb downstream 5.0kb downstream 7660   true Lsat_1_v8_lg_4: 123482373-123490032 Lactuca sativa
Lsat_1_v5_gn_4_77861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 123485033-123490032 Lactuca sativa
Lsat_1_v5_gn_4_77861 10.0kb upstream 10.0kb upstream 12660   true Lsat_1_v8_lg_4: 123472373-123485032 Lactuca sativa
Lsat_1_v5_gn_4_77861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 123472373-123482372 Lactuca sativa
Lsat_1_v5_gn_4_77861 10.0kb downstream 10.0kb downstream 12660   true Lsat_1_v8_lg_4: 123482373-123495032 Lactuca sativa
Lsat_1_v5_gn_4_77861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 123485033-123495032 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478699 5263 Asterids View MSA
123750297 5271 Pentapetalae View MSA
122795499 5272 Eudicot View MSA
122051601 5273 Angiosperm View MSA
121347451 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain