Gene : Lsat_1_v5_gn_4_78821 L. sativa V8
Defline:  (1 of 1) K03037 - 26S proteasome regulatory subunit N7 (PSMD6, RPN7) Genomic Order:  2299
Name:  ? Lsat_1_v5_gn_4_78821 Secondary Identifier:  ? PAC:38929124
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_78821 0.5kb upstream 0.5kb upstream 3756   true Lsat_1_v8_lg_4: 124172662-124176417 Lactuca sativa
Lsat_1_v5_gn_4_78821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 124172662-124173161 Lactuca sativa
Lsat_1_v5_gn_4_78821 0.5kb downstream 0.5kb downstream 3756   true Lsat_1_v8_lg_4: 124173162-124176917 Lactuca sativa
Lsat_1_v5_gn_4_78821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 124176418-124176917 Lactuca sativa
Lsat_1_v5_gn_4_78821 1.0kb upstream 1.0kb upstream 4256   true Lsat_1_v8_lg_4: 124172162-124176417 Lactuca sativa
Lsat_1_v5_gn_4_78821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 124172162-124173161 Lactuca sativa
Lsat_1_v5_gn_4_78821 1.0kb downstream 1.0kb downstream 4256   true Lsat_1_v8_lg_4: 124173162-124177417 Lactuca sativa
Lsat_1_v5_gn_4_78821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 124176418-124177417 Lactuca sativa
Lsat_1_v5_gn_4_78821 2.0kb upstream 2.0kb upstream 5256   true Lsat_1_v8_lg_4: 124171162-124176417 Lactuca sativa
Lsat_1_v5_gn_4_78821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 124171162-124173161 Lactuca sativa
Lsat_1_v5_gn_4_78821 2.0kb downstream 2.0kb downstream 5256   true Lsat_1_v8_lg_4: 124173162-124178417 Lactuca sativa
Lsat_1_v5_gn_4_78821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 124176418-124178417 Lactuca sativa
Lsat_1_v5_gn_4_78821 5.0kb upstream 5.0kb upstream 8256   true Lsat_1_v8_lg_4: 124168162-124176417 Lactuca sativa
Lsat_1_v5_gn_4_78821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 124168162-124173161 Lactuca sativa
Lsat_1_v5_gn_4_78821 5.0kb downstream 5.0kb downstream 8256   true Lsat_1_v8_lg_4: 124173162-124181417 Lactuca sativa
Lsat_1_v5_gn_4_78821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 124176418-124181417 Lactuca sativa
Lsat_1_v5_gn_4_78821 10.0kb upstream 10.0kb upstream 13256   true Lsat_1_v8_lg_4: 124163162-124176417 Lactuca sativa
Lsat_1_v5_gn_4_78821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 124163162-124173161 Lactuca sativa
Lsat_1_v5_gn_4_78821 10.0kb downstream 10.0kb downstream 13256   true Lsat_1_v8_lg_4: 124173162-124186417 Lactuca sativa
Lsat_1_v5_gn_4_78821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 124176418-124186417 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466545 5263 Asterids View MSA
123736562 5271 Pentapetalae View MSA
122788737 5272 Eudicot View MSA
122047339 5273 Angiosperm View MSA
121344552 5274 Embryophyte View MSA
123425003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain