Gene : Lsat_1_v5_gn_4_84561 L. sativa V8
Defline:  (1 of 1) K03428 - magnesium-protoporphyrin O-methyltransferase (E2.1.1.11, chlM, bchM) Genomic Order:  2445
Name:  ? Lsat_1_v5_gn_4_84561 Secondary Identifier:  ? PAC:38930623
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa CHLOROPHYLL-SYN Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_84561 0.5kb upstream 0.5kb upstream 1809   true Lsat_1_v8_lg_4: 135975898-135977706 Lactuca sativa
Lsat_1_v5_gn_4_84561 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 135975898-135976397 Lactuca sativa
Lsat_1_v5_gn_4_84561 0.5kb downstream 0.5kb downstream 1809   true Lsat_1_v8_lg_4: 135976398-135978206 Lactuca sativa
Lsat_1_v5_gn_4_84561 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 135977707-135978206 Lactuca sativa
Lsat_1_v5_gn_4_84561 1.0kb upstream 1.0kb upstream 2309   true Lsat_1_v8_lg_4: 135975398-135977706 Lactuca sativa
Lsat_1_v5_gn_4_84561 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 135975398-135976397 Lactuca sativa
Lsat_1_v5_gn_4_84561 1.0kb downstream 1.0kb downstream 2309   true Lsat_1_v8_lg_4: 135976398-135978706 Lactuca sativa
Lsat_1_v5_gn_4_84561 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 135977707-135978706 Lactuca sativa
Lsat_1_v5_gn_4_84561 2.0kb upstream 2.0kb upstream 3309   true Lsat_1_v8_lg_4: 135974398-135977706 Lactuca sativa
Lsat_1_v5_gn_4_84561 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 135974398-135976397 Lactuca sativa
Lsat_1_v5_gn_4_84561 2.0kb downstream 2.0kb downstream 3309   true Lsat_1_v8_lg_4: 135976398-135979706 Lactuca sativa
Lsat_1_v5_gn_4_84561 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 135977707-135979706 Lactuca sativa
Lsat_1_v5_gn_4_84561 5.0kb upstream 5.0kb upstream 6309   true Lsat_1_v8_lg_4: 135971398-135977706 Lactuca sativa
Lsat_1_v5_gn_4_84561 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 135971398-135976397 Lactuca sativa
Lsat_1_v5_gn_4_84561 5.0kb downstream 5.0kb downstream 6309   true Lsat_1_v8_lg_4: 135976398-135982706 Lactuca sativa
Lsat_1_v5_gn_4_84561 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 135977707-135982706 Lactuca sativa
Lsat_1_v5_gn_4_84561 10.0kb upstream 10.0kb upstream 11309   true Lsat_1_v8_lg_4: 135966398-135977706 Lactuca sativa
Lsat_1_v5_gn_4_84561 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 135966398-135976397 Lactuca sativa
Lsat_1_v5_gn_4_84561 10.0kb downstream 10.0kb downstream 11309   true Lsat_1_v8_lg_4: 135976398-135987706 Lactuca sativa
Lsat_1_v5_gn_4_84561 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 135977707-135987706 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480596 5263 Asterids View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain