Gene : Lsat_1_v5_gn_4_84680 L. sativa V8
Defline:  (1 of 6) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Genomic Order:  2440
Name:  ? Lsat_1_v5_gn_4_84680 Secondary Identifier:  ? PAC:38928268
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_84680 0.5kb upstream 0.5kb upstream 5027   true Lsat_1_v8_lg_4: 135864960-135869986 Lactuca sativa
Lsat_1_v5_gn_4_84680 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 135869487-135869986 Lactuca sativa
Lsat_1_v5_gn_4_84680 0.5kb downstream 0.5kb downstream 5027   true Lsat_1_v8_lg_4: 135864460-135869486 Lactuca sativa
Lsat_1_v5_gn_4_84680 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 135864460-135864959 Lactuca sativa
Lsat_1_v5_gn_4_84680 1.0kb upstream 1.0kb upstream 5527   true Lsat_1_v8_lg_4: 135864960-135870486 Lactuca sativa
Lsat_1_v5_gn_4_84680 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 135869487-135870486 Lactuca sativa
Lsat_1_v5_gn_4_84680 1.0kb downstream 1.0kb downstream 5527   true Lsat_1_v8_lg_4: 135863960-135869486 Lactuca sativa
Lsat_1_v5_gn_4_84680 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 135863960-135864959 Lactuca sativa
Lsat_1_v5_gn_4_84680 2.0kb upstream 2.0kb upstream 6527   true Lsat_1_v8_lg_4: 135864960-135871486 Lactuca sativa
Lsat_1_v5_gn_4_84680 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 135869487-135871486 Lactuca sativa
Lsat_1_v5_gn_4_84680 2.0kb downstream 2.0kb downstream 6527   true Lsat_1_v8_lg_4: 135862960-135869486 Lactuca sativa
Lsat_1_v5_gn_4_84680 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 135862960-135864959 Lactuca sativa
Lsat_1_v5_gn_4_84680 5.0kb upstream 5.0kb upstream 9527   true Lsat_1_v8_lg_4: 135864960-135874486 Lactuca sativa
Lsat_1_v5_gn_4_84680 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 135869487-135874486 Lactuca sativa
Lsat_1_v5_gn_4_84680 5.0kb downstream 5.0kb downstream 9527   true Lsat_1_v8_lg_4: 135859960-135869486 Lactuca sativa
Lsat_1_v5_gn_4_84680 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 135859960-135864959 Lactuca sativa
Lsat_1_v5_gn_4_84680 10.0kb upstream 10.0kb upstream 14527   true Lsat_1_v8_lg_4: 135864960-135879486 Lactuca sativa
Lsat_1_v5_gn_4_84680 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 135869487-135879486 Lactuca sativa
Lsat_1_v5_gn_4_84680 10.0kb downstream 10.0kb downstream 14527   true Lsat_1_v8_lg_4: 135854960-135869486 Lactuca sativa
Lsat_1_v5_gn_4_84680 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 135854960-135864959 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478623 5263 Asterids View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain