Gene : Lsat_1_v5_gn_4_85180 L. sativa V8
Defline:  (1 of 1) PTHR11638//PTHR11638:SF118 - ATP-DEPENDENT CLP PROTEASE // CHAPERONE PROTEIN CLPD, CHLOROPLASTIC Genomic Order:  2470
Name:  ? Lsat_1_v5_gn_4_85180 Secondary Identifier:  ? PAC:38931929
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_4_85180 0.5kb upstream 0.5kb upstream 5177   true Lsat_1_v8_lg_4: 137022443-137027619 Lactuca sativa
Lsat_1_v5_gn_4_85180 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_4: 137022443-137022942 Lactuca sativa
Lsat_1_v5_gn_4_85180 0.5kb downstream 0.5kb downstream 5177   true Lsat_1_v8_lg_4: 137022943-137028119 Lactuca sativa
Lsat_1_v5_gn_4_85180 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_4: 137027620-137028119 Lactuca sativa
Lsat_1_v5_gn_4_85180 1.0kb upstream 1.0kb upstream 5677   true Lsat_1_v8_lg_4: 137021943-137027619 Lactuca sativa
Lsat_1_v5_gn_4_85180 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_4: 137021943-137022942 Lactuca sativa
Lsat_1_v5_gn_4_85180 1.0kb downstream 1.0kb downstream 5677   true Lsat_1_v8_lg_4: 137022943-137028619 Lactuca sativa
Lsat_1_v5_gn_4_85180 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_4: 137027620-137028619 Lactuca sativa
Lsat_1_v5_gn_4_85180 2.0kb upstream 2.0kb upstream 6677   true Lsat_1_v8_lg_4: 137020943-137027619 Lactuca sativa
Lsat_1_v5_gn_4_85180 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_4: 137020943-137022942 Lactuca sativa
Lsat_1_v5_gn_4_85180 2.0kb downstream 2.0kb downstream 6677   true Lsat_1_v8_lg_4: 137022943-137029619 Lactuca sativa
Lsat_1_v5_gn_4_85180 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_4: 137027620-137029619 Lactuca sativa
Lsat_1_v5_gn_4_85180 5.0kb upstream 5.0kb upstream 9677   true Lsat_1_v8_lg_4: 137017943-137027619 Lactuca sativa
Lsat_1_v5_gn_4_85180 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_4: 137017943-137022942 Lactuca sativa
Lsat_1_v5_gn_4_85180 5.0kb downstream 5.0kb downstream 9677   true Lsat_1_v8_lg_4: 137022943-137032619 Lactuca sativa
Lsat_1_v5_gn_4_85180 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_4: 137027620-137032619 Lactuca sativa
Lsat_1_v5_gn_4_85180 10.0kb upstream 10.0kb upstream 14677   true Lsat_1_v8_lg_4: 137012943-137027619 Lactuca sativa
Lsat_1_v5_gn_4_85180 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_4: 137012943-137022942 Lactuca sativa
Lsat_1_v5_gn_4_85180 10.0kb downstream 10.0kb downstream 14677   true Lsat_1_v8_lg_4: 137022943-137037619 Lactuca sativa
Lsat_1_v5_gn_4_85180 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_4: 137027620-137037619 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041323 5273 Angiosperm View MSA
121474726 5263 Asterids View MSA
123740697 5271 Pentapetalae View MSA
122787992 5272 Eudicot View MSA
121345985 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain