Gene : Lsat_1_v5_gn_5_134580 L. sativa V8
Defline:  (1 of 2) PTHR14009//PTHR14009:SF14 - LEUCINE ZIPPER-EF-HAND CONTAINING TRANSMEMBRANE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3565
Name:  ? Lsat_1_v5_gn_5_134580 Secondary Identifier:  ? PAC:38971037
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_134580 0.5kb upstream 0.5kb upstream 6124   true Lsat_1_v8_lg_5: 261188405-261194528 Lactuca sativa
Lsat_1_v5_gn_5_134580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 261194029-261194528 Lactuca sativa
Lsat_1_v5_gn_5_134580 0.5kb downstream 0.5kb downstream 6124   true Lsat_1_v8_lg_5: 261187905-261194028 Lactuca sativa
Lsat_1_v5_gn_5_134580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 261187905-261188404 Lactuca sativa
Lsat_1_v5_gn_5_134580 1.0kb upstream 1.0kb upstream 6624   true Lsat_1_v8_lg_5: 261188405-261195028 Lactuca sativa
Lsat_1_v5_gn_5_134580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 261194029-261195028 Lactuca sativa
Lsat_1_v5_gn_5_134580 1.0kb downstream 1.0kb downstream 6624   true Lsat_1_v8_lg_5: 261187405-261194028 Lactuca sativa
Lsat_1_v5_gn_5_134580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 261187405-261188404 Lactuca sativa
Lsat_1_v5_gn_5_134580 2.0kb upstream 2.0kb upstream 7624   true Lsat_1_v8_lg_5: 261188405-261196028 Lactuca sativa
Lsat_1_v5_gn_5_134580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 261194029-261196028 Lactuca sativa
Lsat_1_v5_gn_5_134580 2.0kb downstream 2.0kb downstream 7624   true Lsat_1_v8_lg_5: 261186405-261194028 Lactuca sativa
Lsat_1_v5_gn_5_134580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 261186405-261188404 Lactuca sativa
Lsat_1_v5_gn_5_134580 5.0kb upstream 5.0kb upstream 10624   true Lsat_1_v8_lg_5: 261188405-261199028 Lactuca sativa
Lsat_1_v5_gn_5_134580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 261194029-261199028 Lactuca sativa
Lsat_1_v5_gn_5_134580 5.0kb downstream 5.0kb downstream 10624   true Lsat_1_v8_lg_5: 261183405-261194028 Lactuca sativa
Lsat_1_v5_gn_5_134580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 261183405-261188404 Lactuca sativa
Lsat_1_v5_gn_5_134580 10.0kb upstream 10.0kb upstream 15624   true Lsat_1_v8_lg_5: 261188405-261204028 Lactuca sativa
Lsat_1_v5_gn_5_134580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 261194029-261204028 Lactuca sativa
Lsat_1_v5_gn_5_134580 10.0kb downstream 10.0kb downstream 15624   true Lsat_1_v8_lg_5: 261178405-261194028 Lactuca sativa
Lsat_1_v5_gn_5_134580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 261178405-261188404 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468590 5263 Asterids View MSA
123742349 5271 Pentapetalae View MSA
122794896 5272 Eudicot View MSA
122048841 5273 Angiosperm View MSA
121311134 5274 Embryophyte View MSA
123348473 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain