Gene : Lsat_1_v5_gn_5_136741 L. sativa V8
Defline:  (1 of 5) PTHR11527//PTHR11527:SF106 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // 17.4 KDA CLASS III HEAT SHOCK PROTEIN Genomic Order:  3665
Name:  ? Lsat_1_v5_gn_5_136741 Secondary Identifier:  ? PAC:38964048
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_136741 0.5kb upstream 0.5kb upstream 1336   true Lsat_1_v8_lg_5: 265589128-265590463 Lactuca sativa
Lsat_1_v5_gn_5_136741 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 265589128-265589627 Lactuca sativa
Lsat_1_v5_gn_5_136741 0.5kb downstream 0.5kb downstream 1336   true Lsat_1_v8_lg_5: 265589628-265590963 Lactuca sativa
Lsat_1_v5_gn_5_136741 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 265590464-265590963 Lactuca sativa
Lsat_1_v5_gn_5_136741 1.0kb upstream 1.0kb upstream 1836   true Lsat_1_v8_lg_5: 265588628-265590463 Lactuca sativa
Lsat_1_v5_gn_5_136741 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 265588628-265589627 Lactuca sativa
Lsat_1_v5_gn_5_136741 1.0kb downstream 1.0kb downstream 1836   true Lsat_1_v8_lg_5: 265589628-265591463 Lactuca sativa
Lsat_1_v5_gn_5_136741 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 265590464-265591463 Lactuca sativa
Lsat_1_v5_gn_5_136741 2.0kb upstream 2.0kb upstream 2836   true Lsat_1_v8_lg_5: 265587628-265590463 Lactuca sativa
Lsat_1_v5_gn_5_136741 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 265587628-265589627 Lactuca sativa
Lsat_1_v5_gn_5_136741 2.0kb downstream 2.0kb downstream 2836   true Lsat_1_v8_lg_5: 265589628-265592463 Lactuca sativa
Lsat_1_v5_gn_5_136741 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 265590464-265592463 Lactuca sativa
Lsat_1_v5_gn_5_136741 5.0kb upstream 5.0kb upstream 5836   true Lsat_1_v8_lg_5: 265584628-265590463 Lactuca sativa
Lsat_1_v5_gn_5_136741 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 265584628-265589627 Lactuca sativa
Lsat_1_v5_gn_5_136741 5.0kb downstream 5.0kb downstream 5836   true Lsat_1_v8_lg_5: 265589628-265595463 Lactuca sativa
Lsat_1_v5_gn_5_136741 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 265590464-265595463 Lactuca sativa
Lsat_1_v5_gn_5_136741 10.0kb upstream 10.0kb upstream 10836   true Lsat_1_v8_lg_5: 265579628-265590463 Lactuca sativa
Lsat_1_v5_gn_5_136741 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 265579628-265589627 Lactuca sativa
Lsat_1_v5_gn_5_136741 10.0kb downstream 10.0kb downstream 10836   true Lsat_1_v8_lg_5: 265589628-265600463 Lactuca sativa
Lsat_1_v5_gn_5_136741 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 265590464-265600463 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026485 5273 Angiosperm View MSA
121470500 5263 Asterids View MSA
123744962 5271 Pentapetalae View MSA
122787860 5272 Eudicot View MSA
121352128 5274 Embryophyte View MSA
123382557 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain