Gene : Lsat_1_v5_gn_5_135921 L. sativa V8
Defline:  (1 of 1) PTHR21717//PTHR21717:SF25 - TELOMERIC REPEAT BINDING PROTEIN // MYB FAMILY TRANSCRIPTION FACTOR TRFL6-RELATED Genomic Order:  3650
Name:  ? Lsat_1_v5_gn_5_135921 Secondary Identifier:  ? PAC:38969705
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_135921 0.5kb upstream 0.5kb upstream 6389   true Lsat_1_v8_lg_5: 265100466-265106854 Lactuca sativa
Lsat_1_v5_gn_5_135921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 265100466-265100965 Lactuca sativa
Lsat_1_v5_gn_5_135921 0.5kb downstream 0.5kb downstream 6389   true Lsat_1_v8_lg_5: 265100966-265107354 Lactuca sativa
Lsat_1_v5_gn_5_135921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 265106855-265107354 Lactuca sativa
Lsat_1_v5_gn_5_135921 1.0kb upstream 1.0kb upstream 6889   true Lsat_1_v8_lg_5: 265099966-265106854 Lactuca sativa
Lsat_1_v5_gn_5_135921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 265099966-265100965 Lactuca sativa
Lsat_1_v5_gn_5_135921 1.0kb downstream 1.0kb downstream 6889   true Lsat_1_v8_lg_5: 265100966-265107854 Lactuca sativa
Lsat_1_v5_gn_5_135921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 265106855-265107854 Lactuca sativa
Lsat_1_v5_gn_5_135921 2.0kb upstream 2.0kb upstream 7889   true Lsat_1_v8_lg_5: 265098966-265106854 Lactuca sativa
Lsat_1_v5_gn_5_135921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 265098966-265100965 Lactuca sativa
Lsat_1_v5_gn_5_135921 2.0kb downstream 2.0kb downstream 7889   true Lsat_1_v8_lg_5: 265100966-265108854 Lactuca sativa
Lsat_1_v5_gn_5_135921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 265106855-265108854 Lactuca sativa
Lsat_1_v5_gn_5_135921 5.0kb upstream 5.0kb upstream 10889   true Lsat_1_v8_lg_5: 265095966-265106854 Lactuca sativa
Lsat_1_v5_gn_5_135921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 265095966-265100965 Lactuca sativa
Lsat_1_v5_gn_5_135921 5.0kb downstream 5.0kb downstream 10889   true Lsat_1_v8_lg_5: 265100966-265111854 Lactuca sativa
Lsat_1_v5_gn_5_135921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 265106855-265111854 Lactuca sativa
Lsat_1_v5_gn_5_135921 10.0kb upstream 10.0kb upstream 15889   true Lsat_1_v8_lg_5: 265090966-265106854 Lactuca sativa
Lsat_1_v5_gn_5_135921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 265090966-265100965 Lactuca sativa
Lsat_1_v5_gn_5_135921 10.0kb downstream 10.0kb downstream 15889   true Lsat_1_v8_lg_5: 265100966-265116854 Lactuca sativa
Lsat_1_v5_gn_5_135921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 265106855-265116854 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472308 5263 Asterids View MSA
123747162 5271 Pentapetalae View MSA
122792164 5272 Eudicot View MSA
122046145 5273 Angiosperm View MSA
123429070 5275 Viridiplantae View MSA
121348022 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain