Gene : Lsat_1_v5_gn_5_139341 L. sativa V8
Defline:  (1 of 7) 2.3.1.179 - Beta-ketoacyl-[acyl-carrier-protein] synthase II / KASII Genomic Order:  3723
Name:  ? Lsat_1_v5_gn_5_139341 Secondary Identifier:  ? PAC:38968573
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5973 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_139341 0.5kb upstream 0.5kb upstream 4043   true Lsat_1_v8_lg_5: 267161266-267165308 Lactuca sativa
Lsat_1_v5_gn_5_139341 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 267161266-267161765 Lactuca sativa
Lsat_1_v5_gn_5_139341 0.5kb downstream 0.5kb downstream 4043   true Lsat_1_v8_lg_5: 267161766-267165808 Lactuca sativa
Lsat_1_v5_gn_5_139341 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 267165309-267165808 Lactuca sativa
Lsat_1_v5_gn_5_139341 1.0kb upstream 1.0kb upstream 4543   true Lsat_1_v8_lg_5: 267160766-267165308 Lactuca sativa
Lsat_1_v5_gn_5_139341 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 267160766-267161765 Lactuca sativa
Lsat_1_v5_gn_5_139341 1.0kb downstream 1.0kb downstream 4543   true Lsat_1_v8_lg_5: 267161766-267166308 Lactuca sativa
Lsat_1_v5_gn_5_139341 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 267165309-267166308 Lactuca sativa
Lsat_1_v5_gn_5_139341 2.0kb upstream 2.0kb upstream 5543   true Lsat_1_v8_lg_5: 267159766-267165308 Lactuca sativa
Lsat_1_v5_gn_5_139341 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 267159766-267161765 Lactuca sativa
Lsat_1_v5_gn_5_139341 2.0kb downstream 2.0kb downstream 5543   true Lsat_1_v8_lg_5: 267161766-267167308 Lactuca sativa
Lsat_1_v5_gn_5_139341 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 267165309-267167308 Lactuca sativa
Lsat_1_v5_gn_5_139341 5.0kb upstream 5.0kb upstream 8543   true Lsat_1_v8_lg_5: 267156766-267165308 Lactuca sativa
Lsat_1_v5_gn_5_139341 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 267156766-267161765 Lactuca sativa
Lsat_1_v5_gn_5_139341 5.0kb downstream 5.0kb downstream 8543   true Lsat_1_v8_lg_5: 267161766-267170308 Lactuca sativa
Lsat_1_v5_gn_5_139341 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 267165309-267170308 Lactuca sativa
Lsat_1_v5_gn_5_139341 10.0kb upstream 10.0kb upstream 13543   true Lsat_1_v8_lg_5: 267151766-267165308 Lactuca sativa
Lsat_1_v5_gn_5_139341 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 267151766-267161765 Lactuca sativa
Lsat_1_v5_gn_5_139341 10.0kb downstream 10.0kb downstream 13543   true Lsat_1_v8_lg_5: 267161766-267175308 Lactuca sativa
Lsat_1_v5_gn_5_139341 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 267165309-267175308 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480230 5263 Asterids View MSA
123738483 5271 Pentapetalae View MSA
122792751 5272 Eudicot View MSA
122051170 5273 Angiosperm View MSA
121345587 5274 Embryophyte View MSA
123424058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain