Gene : Lsat_1_v5_gn_5_144641 L. sativa V8
Defline:  (1 of 4) PTHR22950//PTHR22950:SF228 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 7-RELATED Genomic Order:  3929
Name:  ? Lsat_1_v5_gn_5_144641 Secondary Identifier:  ? PAC:38971807
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_144641 0.5kb upstream 0.5kb upstream 1967   true Lsat_1_v8_lg_5: 276908985-276910951 Lactuca sativa
Lsat_1_v5_gn_5_144641 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 276910452-276910951 Lactuca sativa
Lsat_1_v5_gn_5_144641 0.5kb downstream 0.5kb downstream 1967   true Lsat_1_v8_lg_5: 276908485-276910451 Lactuca sativa
Lsat_1_v5_gn_5_144641 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 276908485-276908984 Lactuca sativa
Lsat_1_v5_gn_5_144641 1.0kb upstream 1.0kb upstream 2467   true Lsat_1_v8_lg_5: 276908985-276911451 Lactuca sativa
Lsat_1_v5_gn_5_144641 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 276910452-276911451 Lactuca sativa
Lsat_1_v5_gn_5_144641 1.0kb downstream 1.0kb downstream 2467   true Lsat_1_v8_lg_5: 276907985-276910451 Lactuca sativa
Lsat_1_v5_gn_5_144641 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 276907985-276908984 Lactuca sativa
Lsat_1_v5_gn_5_144641 2.0kb upstream 2.0kb upstream 3467   true Lsat_1_v8_lg_5: 276908985-276912451 Lactuca sativa
Lsat_1_v5_gn_5_144641 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 276910452-276912451 Lactuca sativa
Lsat_1_v5_gn_5_144641 2.0kb downstream 2.0kb downstream 3467   true Lsat_1_v8_lg_5: 276906985-276910451 Lactuca sativa
Lsat_1_v5_gn_5_144641 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 276906985-276908984 Lactuca sativa
Lsat_1_v5_gn_5_144641 5.0kb upstream 5.0kb upstream 6467   true Lsat_1_v8_lg_5: 276908985-276915451 Lactuca sativa
Lsat_1_v5_gn_5_144641 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 276910452-276915451 Lactuca sativa
Lsat_1_v5_gn_5_144641 5.0kb downstream 5.0kb downstream 6467   true Lsat_1_v8_lg_5: 276903985-276910451 Lactuca sativa
Lsat_1_v5_gn_5_144641 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 276903985-276908984 Lactuca sativa
Lsat_1_v5_gn_5_144641 10.0kb upstream 10.0kb upstream 11467   true Lsat_1_v8_lg_5: 276908985-276920451 Lactuca sativa
Lsat_1_v5_gn_5_144641 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 276910452-276920451 Lactuca sativa
Lsat_1_v5_gn_5_144641 10.0kb downstream 10.0kb downstream 11467   true Lsat_1_v8_lg_5: 276898985-276910451 Lactuca sativa
Lsat_1_v5_gn_5_144641 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 276898985-276908984 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475583 5263 Asterids View MSA
123745911 5271 Pentapetalae View MSA
122771696 5272 Eudicot View MSA
122050905 5273 Angiosperm View MSA
121349854 5274 Embryophyte View MSA
123381472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain