Gene : Lsat_1_v5_gn_5_127501 L. sativa V8
Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21 Genomic Order:  3406
Name:  ? Lsat_1_v5_gn_5_127501 Secondary Identifier:  ? PAC:38970312
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_127501 0.5kb upstream 0.5kb upstream 2597   true Lsat_1_v8_lg_5: 253869266-253871862 Lactuca sativa
Lsat_1_v5_gn_5_127501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 253871363-253871862 Lactuca sativa
Lsat_1_v5_gn_5_127501 0.5kb downstream 0.5kb downstream 2597   true Lsat_1_v8_lg_5: 253868766-253871362 Lactuca sativa
Lsat_1_v5_gn_5_127501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 253868766-253869265 Lactuca sativa
Lsat_1_v5_gn_5_127501 1.0kb upstream 1.0kb upstream 3097   true Lsat_1_v8_lg_5: 253869266-253872362 Lactuca sativa
Lsat_1_v5_gn_5_127501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 253871363-253872362 Lactuca sativa
Lsat_1_v5_gn_5_127501 1.0kb downstream 1.0kb downstream 3097   true Lsat_1_v8_lg_5: 253868266-253871362 Lactuca sativa
Lsat_1_v5_gn_5_127501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 253868266-253869265 Lactuca sativa
Lsat_1_v5_gn_5_127501 2.0kb upstream 2.0kb upstream 4097   true Lsat_1_v8_lg_5: 253869266-253873362 Lactuca sativa
Lsat_1_v5_gn_5_127501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 253871363-253873362 Lactuca sativa
Lsat_1_v5_gn_5_127501 2.0kb downstream 2.0kb downstream 4097   true Lsat_1_v8_lg_5: 253867266-253871362 Lactuca sativa
Lsat_1_v5_gn_5_127501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 253867266-253869265 Lactuca sativa
Lsat_1_v5_gn_5_127501 5.0kb upstream 5.0kb upstream 7097   true Lsat_1_v8_lg_5: 253869266-253876362 Lactuca sativa
Lsat_1_v5_gn_5_127501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 253871363-253876362 Lactuca sativa
Lsat_1_v5_gn_5_127501 5.0kb downstream 5.0kb downstream 7097   true Lsat_1_v8_lg_5: 253864266-253871362 Lactuca sativa
Lsat_1_v5_gn_5_127501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 253864266-253869265 Lactuca sativa
Lsat_1_v5_gn_5_127501 10.0kb upstream 10.0kb upstream 12097   true Lsat_1_v8_lg_5: 253869266-253881362 Lactuca sativa
Lsat_1_v5_gn_5_127501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 253871363-253881362 Lactuca sativa
Lsat_1_v5_gn_5_127501 10.0kb downstream 10.0kb downstream 12097   true Lsat_1_v8_lg_5: 253859266-253871362 Lactuca sativa
Lsat_1_v5_gn_5_127501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 253859266-253869265 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474247 5263 Asterids View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain