Gene : Lsat_1_v5_gn_5_130021 L. sativa V8
Defline:  (1 of 3) K17302 - coatomer, subunit beta' (COPB2, SEC27) Genomic Order:  3521
Name:  ? Lsat_1_v5_gn_5_130021 Secondary Identifier:  ? PAC:38970767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_130021 0.5kb upstream 0.5kb upstream 7477   true Lsat_1_v8_lg_5: 259893891-259901367 Lactuca sativa
Lsat_1_v5_gn_5_130021 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 259900868-259901367 Lactuca sativa
Lsat_1_v5_gn_5_130021 0.5kb downstream 0.5kb downstream 7477   true Lsat_1_v8_lg_5: 259893391-259900867 Lactuca sativa
Lsat_1_v5_gn_5_130021 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 259893391-259893890 Lactuca sativa
Lsat_1_v5_gn_5_130021 1.0kb upstream 1.0kb upstream 7977   true Lsat_1_v8_lg_5: 259893891-259901867 Lactuca sativa
Lsat_1_v5_gn_5_130021 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 259900868-259901867 Lactuca sativa
Lsat_1_v5_gn_5_130021 1.0kb downstream 1.0kb downstream 7977   true Lsat_1_v8_lg_5: 259892891-259900867 Lactuca sativa
Lsat_1_v5_gn_5_130021 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 259892891-259893890 Lactuca sativa
Lsat_1_v5_gn_5_130021 2.0kb upstream 2.0kb upstream 8977   true Lsat_1_v8_lg_5: 259893891-259902867 Lactuca sativa
Lsat_1_v5_gn_5_130021 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 259900868-259902867 Lactuca sativa
Lsat_1_v5_gn_5_130021 2.0kb downstream 2.0kb downstream 8977   true Lsat_1_v8_lg_5: 259891891-259900867 Lactuca sativa
Lsat_1_v5_gn_5_130021 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 259891891-259893890 Lactuca sativa
Lsat_1_v5_gn_5_130021 5.0kb upstream 5.0kb upstream 11977   true Lsat_1_v8_lg_5: 259893891-259905867 Lactuca sativa
Lsat_1_v5_gn_5_130021 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 259900868-259905867 Lactuca sativa
Lsat_1_v5_gn_5_130021 5.0kb downstream 5.0kb downstream 11977   true Lsat_1_v8_lg_5: 259888891-259900867 Lactuca sativa
Lsat_1_v5_gn_5_130021 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 259888891-259893890 Lactuca sativa
Lsat_1_v5_gn_5_130021 10.0kb upstream 10.0kb upstream 16977   true Lsat_1_v8_lg_5: 259893891-259910867 Lactuca sativa
Lsat_1_v5_gn_5_130021 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 259900868-259910867 Lactuca sativa
Lsat_1_v5_gn_5_130021 10.0kb downstream 10.0kb downstream 16977   true Lsat_1_v8_lg_5: 259883891-259900867 Lactuca sativa
Lsat_1_v5_gn_5_130021 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 259883891-259893890 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478959 5263 Asterids View MSA
123745194 5271 Pentapetalae View MSA
122792729 5272 Eudicot View MSA
122046089 5273 Angiosperm View MSA
121350905 5274 Embryophyte View MSA
123424044 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain