Gene : Lsat_1_v5_gn_5_130940 L. sativa V8
Defline:  (1 of 1) PTHR10744//PTHR10744:SF7 - 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER // 30S RIBOSOMAL PROTEIN S17, CHLOROPLASTIC Genomic Order:  3555
Name:  ? Lsat_1_v5_gn_5_130940 Secondary Identifier:  ? PAC:38971342
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_130940 0.5kb upstream 0.5kb upstream 1188   true Lsat_1_v8_lg_5: 260782435-260783622 Lactuca sativa
Lsat_1_v5_gn_5_130940 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 260782435-260782934 Lactuca sativa
Lsat_1_v5_gn_5_130940 0.5kb downstream 0.5kb downstream 1188   true Lsat_1_v8_lg_5: 260782935-260784122 Lactuca sativa
Lsat_1_v5_gn_5_130940 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 260783623-260784122 Lactuca sativa
Lsat_1_v5_gn_5_130940 1.0kb upstream 1.0kb upstream 1688   true Lsat_1_v8_lg_5: 260781935-260783622 Lactuca sativa
Lsat_1_v5_gn_5_130940 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 260781935-260782934 Lactuca sativa
Lsat_1_v5_gn_5_130940 1.0kb downstream 1.0kb downstream 1688   true Lsat_1_v8_lg_5: 260782935-260784622 Lactuca sativa
Lsat_1_v5_gn_5_130940 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 260783623-260784622 Lactuca sativa
Lsat_1_v5_gn_5_130940 2.0kb upstream 2.0kb upstream 2688   true Lsat_1_v8_lg_5: 260780935-260783622 Lactuca sativa
Lsat_1_v5_gn_5_130940 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 260780935-260782934 Lactuca sativa
Lsat_1_v5_gn_5_130940 2.0kb downstream 2.0kb downstream 2688   true Lsat_1_v8_lg_5: 260782935-260785622 Lactuca sativa
Lsat_1_v5_gn_5_130940 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 260783623-260785622 Lactuca sativa
Lsat_1_v5_gn_5_130940 5.0kb upstream 5.0kb upstream 5688   true Lsat_1_v8_lg_5: 260777935-260783622 Lactuca sativa
Lsat_1_v5_gn_5_130940 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 260777935-260782934 Lactuca sativa
Lsat_1_v5_gn_5_130940 5.0kb downstream 5.0kb downstream 5688   true Lsat_1_v8_lg_5: 260782935-260788622 Lactuca sativa
Lsat_1_v5_gn_5_130940 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 260783623-260788622 Lactuca sativa
Lsat_1_v5_gn_5_130940 10.0kb upstream 10.0kb upstream 10688   true Lsat_1_v8_lg_5: 260772935-260783622 Lactuca sativa
Lsat_1_v5_gn_5_130940 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 260772935-260782934 Lactuca sativa
Lsat_1_v5_gn_5_130940 10.0kb downstream 10.0kb downstream 10688   true Lsat_1_v8_lg_5: 260782935-260793622 Lactuca sativa
Lsat_1_v5_gn_5_130940 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 260783623-260793622 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474696 5263 Asterids View MSA
123744369 5271 Pentapetalae View MSA
122786157 5272 Eudicot View MSA
122045320 5273 Angiosperm View MSA
121347348 5274 Embryophyte View MSA
123424165 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain