Gene : Lsat_1_v5_gn_5_177800 L. sativa V8
Defline:  (1 of 1) PTHR31808//PTHR31808:SF2 - FAMILY NOT NAMED // F21O3.2 PROTEIN-RELATED Genomic Order:  4913
Name:  ? Lsat_1_v5_gn_5_177800 Secondary Identifier:  ? PAC:38965043
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_177800 0.5kb upstream 0.5kb upstream 2476   true Lsat_1_v8_lg_5: 323122369-323124844 Lactuca sativa
Lsat_1_v5_gn_5_177800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 323122369-323122868 Lactuca sativa
Lsat_1_v5_gn_5_177800 0.5kb downstream 0.5kb downstream 2476   true Lsat_1_v8_lg_5: 323122869-323125344 Lactuca sativa
Lsat_1_v5_gn_5_177800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 323124845-323125344 Lactuca sativa
Lsat_1_v5_gn_5_177800 1.0kb upstream 1.0kb upstream 2976   true Lsat_1_v8_lg_5: 323121869-323124844 Lactuca sativa
Lsat_1_v5_gn_5_177800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 323121869-323122868 Lactuca sativa
Lsat_1_v5_gn_5_177800 1.0kb downstream 1.0kb downstream 2976   true Lsat_1_v8_lg_5: 323122869-323125844 Lactuca sativa
Lsat_1_v5_gn_5_177800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 323124845-323125844 Lactuca sativa
Lsat_1_v5_gn_5_177800 2.0kb upstream 2.0kb upstream 3976   true Lsat_1_v8_lg_5: 323120869-323124844 Lactuca sativa
Lsat_1_v5_gn_5_177800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 323120869-323122868 Lactuca sativa
Lsat_1_v5_gn_5_177800 2.0kb downstream 2.0kb downstream 3976   true Lsat_1_v8_lg_5: 323122869-323126844 Lactuca sativa
Lsat_1_v5_gn_5_177800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 323124845-323126844 Lactuca sativa
Lsat_1_v5_gn_5_177800 5.0kb upstream 5.0kb upstream 6976   true Lsat_1_v8_lg_5: 323117869-323124844 Lactuca sativa
Lsat_1_v5_gn_5_177800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 323117869-323122868 Lactuca sativa
Lsat_1_v5_gn_5_177800 5.0kb downstream 5.0kb downstream 6976   true Lsat_1_v8_lg_5: 323122869-323129844 Lactuca sativa
Lsat_1_v5_gn_5_177800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 323124845-323129844 Lactuca sativa
Lsat_1_v5_gn_5_177800 10.0kb upstream 10.0kb upstream 11976   true Lsat_1_v8_lg_5: 323112869-323124844 Lactuca sativa
Lsat_1_v5_gn_5_177800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 323112869-323122868 Lactuca sativa
Lsat_1_v5_gn_5_177800 10.0kb downstream 10.0kb downstream 11976   true Lsat_1_v8_lg_5: 323122869-323134844 Lactuca sativa
Lsat_1_v5_gn_5_177800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 323124845-323134844 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475098 5263 Asterids View MSA
123742613 5271 Pentapetalae View MSA
122790300 5272 Eudicot View MSA
122047287 5273 Angiosperm View MSA
121310722 5274 Embryophyte View MSA
123428654 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain