Gene : Lsat_1_v5_gn_5_187301 L. sativa V8
Defline:  (1 of 6) KOG3140 - Predicted membrane protein Genomic Order:  5208
Name:  ? Lsat_1_v5_gn_5_187301 Secondary Identifier:  ? PAC:38966746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_187301 0.5kb upstream 0.5kb upstream 4541   true Lsat_1_v8_lg_5: 335996289-336000829 Lactuca sativa
Lsat_1_v5_gn_5_187301 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 335996289-335996788 Lactuca sativa
Lsat_1_v5_gn_5_187301 0.5kb downstream 0.5kb downstream 4541   true Lsat_1_v8_lg_5: 335996789-336001329 Lactuca sativa
Lsat_1_v5_gn_5_187301 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 336000830-336001329 Lactuca sativa
Lsat_1_v5_gn_5_187301 1.0kb upstream 1.0kb upstream 5041   true Lsat_1_v8_lg_5: 335995789-336000829 Lactuca sativa
Lsat_1_v5_gn_5_187301 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 335995789-335996788 Lactuca sativa
Lsat_1_v5_gn_5_187301 1.0kb downstream 1.0kb downstream 5041   true Lsat_1_v8_lg_5: 335996789-336001829 Lactuca sativa
Lsat_1_v5_gn_5_187301 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 336000830-336001829 Lactuca sativa
Lsat_1_v5_gn_5_187301 2.0kb upstream 2.0kb upstream 6041   true Lsat_1_v8_lg_5: 335994789-336000829 Lactuca sativa
Lsat_1_v5_gn_5_187301 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 335994789-335996788 Lactuca sativa
Lsat_1_v5_gn_5_187301 2.0kb downstream 2.0kb downstream 6041   true Lsat_1_v8_lg_5: 335996789-336002829 Lactuca sativa
Lsat_1_v5_gn_5_187301 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 336000830-336002829 Lactuca sativa
Lsat_1_v5_gn_5_187301 5.0kb upstream 5.0kb upstream 9041   true Lsat_1_v8_lg_5: 335991789-336000829 Lactuca sativa
Lsat_1_v5_gn_5_187301 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 335991789-335996788 Lactuca sativa
Lsat_1_v5_gn_5_187301 5.0kb downstream 5.0kb downstream 9041   true Lsat_1_v8_lg_5: 335996789-336005829 Lactuca sativa
Lsat_1_v5_gn_5_187301 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 336000830-336005829 Lactuca sativa
Lsat_1_v5_gn_5_187301 10.0kb upstream 10.0kb upstream 14041   true Lsat_1_v8_lg_5: 335986789-336000829 Lactuca sativa
Lsat_1_v5_gn_5_187301 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 335986789-335996788 Lactuca sativa
Lsat_1_v5_gn_5_187301 10.0kb downstream 10.0kb downstream 14041   true Lsat_1_v8_lg_5: 335996789-336010829 Lactuca sativa
Lsat_1_v5_gn_5_187301 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 336000830-336010829 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479660 5263 Asterids View MSA
123740563 5271 Pentapetalae View MSA
122790224 5272 Eudicot View MSA
122051271 5273 Angiosperm View MSA
121349848 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain