Gene : Lsat_1_v5_gn_5_186660 L. sativa V8
Defline:  (1 of 2) PTHR31614:SF2 - F28N24.16 PROTEIN Genomic Order:  5079
Name:  ? Lsat_1_v5_gn_5_186660 Secondary Identifier:  ? PAC:38971432
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_186660 0.5kb upstream 0.5kb upstream 1034   true Lsat_1_v8_lg_5: 330032737-330033770 Lactuca sativa
Lsat_1_v5_gn_5_186660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 330032737-330033236 Lactuca sativa
Lsat_1_v5_gn_5_186660 0.5kb downstream 0.5kb downstream 1034   true Lsat_1_v8_lg_5: 330033237-330034270 Lactuca sativa
Lsat_1_v5_gn_5_186660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 330033771-330034270 Lactuca sativa
Lsat_1_v5_gn_5_186660 1.0kb upstream 1.0kb upstream 1534   true Lsat_1_v8_lg_5: 330032237-330033770 Lactuca sativa
Lsat_1_v5_gn_5_186660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 330032237-330033236 Lactuca sativa
Lsat_1_v5_gn_5_186660 1.0kb downstream 1.0kb downstream 1534   true Lsat_1_v8_lg_5: 330033237-330034770 Lactuca sativa
Lsat_1_v5_gn_5_186660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 330033771-330034770 Lactuca sativa
Lsat_1_v5_gn_5_186660 2.0kb upstream 2.0kb upstream 2534   true Lsat_1_v8_lg_5: 330031237-330033770 Lactuca sativa
Lsat_1_v5_gn_5_186660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 330031237-330033236 Lactuca sativa
Lsat_1_v5_gn_5_186660 2.0kb downstream 2.0kb downstream 2534   true Lsat_1_v8_lg_5: 330033237-330035770 Lactuca sativa
Lsat_1_v5_gn_5_186660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 330033771-330035770 Lactuca sativa
Lsat_1_v5_gn_5_186660 5.0kb upstream 5.0kb upstream 5534   true Lsat_1_v8_lg_5: 330028237-330033770 Lactuca sativa
Lsat_1_v5_gn_5_186660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 330028237-330033236 Lactuca sativa
Lsat_1_v5_gn_5_186660 5.0kb downstream 5.0kb downstream 5534   true Lsat_1_v8_lg_5: 330033237-330038770 Lactuca sativa
Lsat_1_v5_gn_5_186660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 330033771-330038770 Lactuca sativa
Lsat_1_v5_gn_5_186660 10.0kb upstream 10.0kb upstream 10534   true Lsat_1_v8_lg_5: 330023237-330033770 Lactuca sativa
Lsat_1_v5_gn_5_186660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 330023237-330033236 Lactuca sativa
Lsat_1_v5_gn_5_186660 10.0kb downstream 10.0kb downstream 10534   true Lsat_1_v8_lg_5: 330033237-330043770 Lactuca sativa
Lsat_1_v5_gn_5_186660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 330033771-330043770 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478283 5263 Asterids View MSA
123747822 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain