Gene : Lsat_1_v5_gn_5_187560 L. sativa V8
Defline:  (1 of 1) PTHR23115//PTHR23115:SF155 - TRANSLATION FACTOR // SUBFAMILY NOT NAMED Genomic Order:  5197
Name:  ? Lsat_1_v5_gn_5_187560 Secondary Identifier:  ? PAC:38968276
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_187560 0.5kb upstream 0.5kb upstream 9404   true Lsat_1_v8_lg_5: 335816047-335825450 Lactuca sativa
Lsat_1_v5_gn_5_187560 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 335824951-335825450 Lactuca sativa
Lsat_1_v5_gn_5_187560 0.5kb downstream 0.5kb downstream 9404   true Lsat_1_v8_lg_5: 335815547-335824950 Lactuca sativa
Lsat_1_v5_gn_5_187560 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 335815547-335816046 Lactuca sativa
Lsat_1_v5_gn_5_187560 1.0kb upstream 1.0kb upstream 9904   true Lsat_1_v8_lg_5: 335816047-335825950 Lactuca sativa
Lsat_1_v5_gn_5_187560 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 335824951-335825950 Lactuca sativa
Lsat_1_v5_gn_5_187560 1.0kb downstream 1.0kb downstream 9904   true Lsat_1_v8_lg_5: 335815047-335824950 Lactuca sativa
Lsat_1_v5_gn_5_187560 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 335815047-335816046 Lactuca sativa
Lsat_1_v5_gn_5_187560 2.0kb upstream 2.0kb upstream 10904   true Lsat_1_v8_lg_5: 335816047-335826950 Lactuca sativa
Lsat_1_v5_gn_5_187560 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 335824951-335826950 Lactuca sativa
Lsat_1_v5_gn_5_187560 2.0kb downstream 2.0kb downstream 10904   true Lsat_1_v8_lg_5: 335814047-335824950 Lactuca sativa
Lsat_1_v5_gn_5_187560 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 335814047-335816046 Lactuca sativa
Lsat_1_v5_gn_5_187560 5.0kb upstream 5.0kb upstream 13904   true Lsat_1_v8_lg_5: 335816047-335829950 Lactuca sativa
Lsat_1_v5_gn_5_187560 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 335824951-335829950 Lactuca sativa
Lsat_1_v5_gn_5_187560 5.0kb downstream 5.0kb downstream 13904   true Lsat_1_v8_lg_5: 335811047-335824950 Lactuca sativa
Lsat_1_v5_gn_5_187560 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 335811047-335816046 Lactuca sativa
Lsat_1_v5_gn_5_187560 10.0kb upstream 10.0kb upstream 18904   true Lsat_1_v8_lg_5: 335816047-335834950 Lactuca sativa
Lsat_1_v5_gn_5_187560 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 335824951-335834950 Lactuca sativa
Lsat_1_v5_gn_5_187560 10.0kb downstream 10.0kb downstream 18904   true Lsat_1_v8_lg_5: 335806047-335824950 Lactuca sativa
Lsat_1_v5_gn_5_187560 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 335806047-335816046 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475728 5263 Asterids View MSA
123739594 5271 Pentapetalae View MSA
122788926 5272 Eudicot View MSA
122047796 5273 Angiosperm View MSA
121347334 5274 Embryophyte View MSA
123424775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain