Gene : Lsat_1_v5_gn_5_188780 L. sativa V8
Defline:  (1 of 1) PTHR22939:SF83 - PROTEASE DO-LIKE 2, CHLOROPLASTIC Genomic Order:  5234
Name:  ? Lsat_1_v5_gn_5_188780 Secondary Identifier:  ? PAC:38968205
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_188780 0.5kb upstream 0.5kb upstream 5184   true Lsat_1_v8_lg_5: 336909306-336914489 Lactuca sativa
Lsat_1_v5_gn_5_188780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 336909306-336909805 Lactuca sativa
Lsat_1_v5_gn_5_188780 0.5kb downstream 0.5kb downstream 5184   true Lsat_1_v8_lg_5: 336909806-336914989 Lactuca sativa
Lsat_1_v5_gn_5_188780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 336914490-336914989 Lactuca sativa
Lsat_1_v5_gn_5_188780 1.0kb upstream 1.0kb upstream 5684   true Lsat_1_v8_lg_5: 336908806-336914489 Lactuca sativa
Lsat_1_v5_gn_5_188780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 336908806-336909805 Lactuca sativa
Lsat_1_v5_gn_5_188780 1.0kb downstream 1.0kb downstream 5684   true Lsat_1_v8_lg_5: 336909806-336915489 Lactuca sativa
Lsat_1_v5_gn_5_188780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 336914490-336915489 Lactuca sativa
Lsat_1_v5_gn_5_188780 2.0kb upstream 2.0kb upstream 6684   true Lsat_1_v8_lg_5: 336907806-336914489 Lactuca sativa
Lsat_1_v5_gn_5_188780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 336907806-336909805 Lactuca sativa
Lsat_1_v5_gn_5_188780 2.0kb downstream 2.0kb downstream 6684   true Lsat_1_v8_lg_5: 336909806-336916489 Lactuca sativa
Lsat_1_v5_gn_5_188780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 336914490-336916489 Lactuca sativa
Lsat_1_v5_gn_5_188780 5.0kb upstream 5.0kb upstream 9684   true Lsat_1_v8_lg_5: 336904806-336914489 Lactuca sativa
Lsat_1_v5_gn_5_188780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 336904806-336909805 Lactuca sativa
Lsat_1_v5_gn_5_188780 5.0kb downstream 5.0kb downstream 9684   true Lsat_1_v8_lg_5: 336909806-336919489 Lactuca sativa
Lsat_1_v5_gn_5_188780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 336914490-336919489 Lactuca sativa
Lsat_1_v5_gn_5_188780 10.0kb upstream 10.0kb upstream 14684   true Lsat_1_v8_lg_5: 336899806-336914489 Lactuca sativa
Lsat_1_v5_gn_5_188780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 336899806-336909805 Lactuca sativa
Lsat_1_v5_gn_5_188780 10.0kb downstream 10.0kb downstream 14684   true Lsat_1_v8_lg_5: 336909806-336924489 Lactuca sativa
Lsat_1_v5_gn_5_188780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 336914490-336924489 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467962 5263 Asterids View MSA
123746300 5271 Pentapetalae View MSA
122793106 5272 Eudicot View MSA
122044524 5273 Angiosperm View MSA
123429293 5275 Viridiplantae View MSA
121310306 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain