Gene : Lsat_1_v5_gn_5_189001 L. sativa V8
Defline:  (1 of 5) PTHR10168//PTHR10168:SF57 - GLUTAREDOXIN // GLUTAREDOXIN-C13-RELATED Genomic Order:  5242
Name:  ? Lsat_1_v5_gn_5_189001 Secondary Identifier:  ? PAC:38965017
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa THIOREDOX-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_189001 0.5kb upstream 0.5kb upstream 809   true Lsat_1_v8_lg_5: 337196888-337197696 Lactuca sativa
Lsat_1_v5_gn_5_189001 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 337197197-337197696 Lactuca sativa
Lsat_1_v5_gn_5_189001 0.5kb downstream 0.5kb downstream 809   true Lsat_1_v8_lg_5: 337196388-337197196 Lactuca sativa
Lsat_1_v5_gn_5_189001 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 337196388-337196887 Lactuca sativa
Lsat_1_v5_gn_5_189001 1.0kb upstream 1.0kb upstream 1309   true Lsat_1_v8_lg_5: 337196888-337198196 Lactuca sativa
Lsat_1_v5_gn_5_189001 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 337197197-337198196 Lactuca sativa
Lsat_1_v5_gn_5_189001 1.0kb downstream 1.0kb downstream 1309   true Lsat_1_v8_lg_5: 337195888-337197196 Lactuca sativa
Lsat_1_v5_gn_5_189001 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 337195888-337196887 Lactuca sativa
Lsat_1_v5_gn_5_189001 2.0kb upstream 2.0kb upstream 2309   true Lsat_1_v8_lg_5: 337196888-337199196 Lactuca sativa
Lsat_1_v5_gn_5_189001 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 337197197-337199196 Lactuca sativa
Lsat_1_v5_gn_5_189001 2.0kb downstream 2.0kb downstream 2309   true Lsat_1_v8_lg_5: 337194888-337197196 Lactuca sativa
Lsat_1_v5_gn_5_189001 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 337194888-337196887 Lactuca sativa
Lsat_1_v5_gn_5_189001 5.0kb upstream 5.0kb upstream 5309   true Lsat_1_v8_lg_5: 337196888-337202196 Lactuca sativa
Lsat_1_v5_gn_5_189001 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 337197197-337202196 Lactuca sativa
Lsat_1_v5_gn_5_189001 5.0kb downstream 5.0kb downstream 5309   true Lsat_1_v8_lg_5: 337191888-337197196 Lactuca sativa
Lsat_1_v5_gn_5_189001 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 337191888-337196887 Lactuca sativa
Lsat_1_v5_gn_5_189001 10.0kb upstream 10.0kb upstream 10309   true Lsat_1_v8_lg_5: 337196888-337207196 Lactuca sativa
Lsat_1_v5_gn_5_189001 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 337197197-337207196 Lactuca sativa
Lsat_1_v5_gn_5_189001 10.0kb downstream 10.0kb downstream 10309   true Lsat_1_v8_lg_5: 337186888-337197196 Lactuca sativa
Lsat_1_v5_gn_5_189001 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 337186888-337196887 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028026 5273 Angiosperm View MSA
121470516 5263 Asterids View MSA
123747538 5271 Pentapetalae View MSA
122788985 5272 Eudicot View MSA
121297578 5274 Embryophyte View MSA
123335620 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain