Gene : Lsat_1_v5_gn_5_188620 L. sativa V8
Defline:  (1 of 3) K14493 - gibberellin receptor GID1 (GID1) Genomic Order:  5220
Name:  ? Lsat_1_v5_gn_5_188620 Secondary Identifier:  ? PAC:38968950
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6303 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_188620 0.5kb upstream 0.5kb upstream 2577   true Lsat_1_v8_lg_5: 336453312-336455888 Lactuca sativa
Lsat_1_v5_gn_5_188620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 336453312-336453811 Lactuca sativa
Lsat_1_v5_gn_5_188620 0.5kb downstream 0.5kb downstream 2577   true Lsat_1_v8_lg_5: 336453812-336456388 Lactuca sativa
Lsat_1_v5_gn_5_188620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 336455889-336456388 Lactuca sativa
Lsat_1_v5_gn_5_188620 1.0kb upstream 1.0kb upstream 3077   true Lsat_1_v8_lg_5: 336452812-336455888 Lactuca sativa
Lsat_1_v5_gn_5_188620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 336452812-336453811 Lactuca sativa
Lsat_1_v5_gn_5_188620 1.0kb downstream 1.0kb downstream 3077   true Lsat_1_v8_lg_5: 336453812-336456888 Lactuca sativa
Lsat_1_v5_gn_5_188620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 336455889-336456888 Lactuca sativa
Lsat_1_v5_gn_5_188620 2.0kb upstream 2.0kb upstream 4077   true Lsat_1_v8_lg_5: 336451812-336455888 Lactuca sativa
Lsat_1_v5_gn_5_188620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 336451812-336453811 Lactuca sativa
Lsat_1_v5_gn_5_188620 2.0kb downstream 2.0kb downstream 4077   true Lsat_1_v8_lg_5: 336453812-336457888 Lactuca sativa
Lsat_1_v5_gn_5_188620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 336455889-336457888 Lactuca sativa
Lsat_1_v5_gn_5_188620 5.0kb upstream 5.0kb upstream 7077   true Lsat_1_v8_lg_5: 336448812-336455888 Lactuca sativa
Lsat_1_v5_gn_5_188620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 336448812-336453811 Lactuca sativa
Lsat_1_v5_gn_5_188620 5.0kb downstream 5.0kb downstream 7077   true Lsat_1_v8_lg_5: 336453812-336460888 Lactuca sativa
Lsat_1_v5_gn_5_188620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 336455889-336460888 Lactuca sativa
Lsat_1_v5_gn_5_188620 10.0kb upstream 10.0kb upstream 12077   true Lsat_1_v8_lg_5: 336443812-336455888 Lactuca sativa
Lsat_1_v5_gn_5_188620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 336443812-336453811 Lactuca sativa
Lsat_1_v5_gn_5_188620 10.0kb downstream 10.0kb downstream 12077   true Lsat_1_v8_lg_5: 336453812-336465888 Lactuca sativa
Lsat_1_v5_gn_5_188620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 336455889-336465888 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121452096 5263 Asterids View MSA
123745605 5271 Pentapetalae View MSA
122795616 5272 Eudicot View MSA
122044098 5273 Angiosperm View MSA
123428915 5275 Viridiplantae View MSA
121350684 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain