Gene : Lsat_1_v5_gn_5_189400 L. sativa V8
Defline:  (1 of 1) PTHR12506:SF19 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 32 Genomic Order:  5253
Name:  ? Lsat_1_v5_gn_5_189400 Secondary Identifier:  ? PAC:38965056
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_189400 0.5kb upstream 0.5kb upstream 2999   true Lsat_1_v8_lg_5: 337604440-337607438 Lactuca sativa
Lsat_1_v5_gn_5_189400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 337606939-337607438 Lactuca sativa
Lsat_1_v5_gn_5_189400 0.5kb downstream 0.5kb downstream 2999   true Lsat_1_v8_lg_5: 337603940-337606938 Lactuca sativa
Lsat_1_v5_gn_5_189400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 337603940-337604439 Lactuca sativa
Lsat_1_v5_gn_5_189400 1.0kb upstream 1.0kb upstream 3499   true Lsat_1_v8_lg_5: 337604440-337607938 Lactuca sativa
Lsat_1_v5_gn_5_189400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 337606939-337607938 Lactuca sativa
Lsat_1_v5_gn_5_189400 1.0kb downstream 1.0kb downstream 3499   true Lsat_1_v8_lg_5: 337603440-337606938 Lactuca sativa
Lsat_1_v5_gn_5_189400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 337603440-337604439 Lactuca sativa
Lsat_1_v5_gn_5_189400 2.0kb upstream 2.0kb upstream 4499   true Lsat_1_v8_lg_5: 337604440-337608938 Lactuca sativa
Lsat_1_v5_gn_5_189400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 337606939-337608938 Lactuca sativa
Lsat_1_v5_gn_5_189400 2.0kb downstream 2.0kb downstream 4499   true Lsat_1_v8_lg_5: 337602440-337606938 Lactuca sativa
Lsat_1_v5_gn_5_189400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 337602440-337604439 Lactuca sativa
Lsat_1_v5_gn_5_189400 5.0kb upstream 5.0kb upstream 7499   true Lsat_1_v8_lg_5: 337604440-337611938 Lactuca sativa
Lsat_1_v5_gn_5_189400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 337606939-337611938 Lactuca sativa
Lsat_1_v5_gn_5_189400 5.0kb downstream 5.0kb downstream 7499   true Lsat_1_v8_lg_5: 337599440-337606938 Lactuca sativa
Lsat_1_v5_gn_5_189400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 337599440-337604439 Lactuca sativa
Lsat_1_v5_gn_5_189400 10.0kb upstream 10.0kb upstream 12499   true Lsat_1_v8_lg_5: 337604440-337616938 Lactuca sativa
Lsat_1_v5_gn_5_189400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 337606939-337616938 Lactuca sativa
Lsat_1_v5_gn_5_189400 10.0kb downstream 10.0kb downstream 12499   true Lsat_1_v8_lg_5: 337594440-337606938 Lactuca sativa
Lsat_1_v5_gn_5_189400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 337594440-337604439 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477395 5263 Asterids View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain