Gene : Lsat_1_v5_gn_5_154920 L. sativa V8
Defline:  (1 of 2) K08956 - AFG3 family protein [EC:3.4.24.-] (AFG3) Genomic Order:  4259
Name:  ? Lsat_1_v5_gn_5_154920 Secondary Identifier:  ? PAC:38966996
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_154920 0.5kb upstream 0.5kb upstream 9360   true Lsat_1_v8_lg_5: 293090488-293099847 Lactuca sativa
Lsat_1_v5_gn_5_154920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 293090488-293090987 Lactuca sativa
Lsat_1_v5_gn_5_154920 0.5kb downstream 0.5kb downstream 9360   true Lsat_1_v8_lg_5: 293090988-293100347 Lactuca sativa
Lsat_1_v5_gn_5_154920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 293099848-293100347 Lactuca sativa
Lsat_1_v5_gn_5_154920 1.0kb upstream 1.0kb upstream 9860   true Lsat_1_v8_lg_5: 293089988-293099847 Lactuca sativa
Lsat_1_v5_gn_5_154920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 293089988-293090987 Lactuca sativa
Lsat_1_v5_gn_5_154920 1.0kb downstream 1.0kb downstream 9860   true Lsat_1_v8_lg_5: 293090988-293100847 Lactuca sativa
Lsat_1_v5_gn_5_154920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 293099848-293100847 Lactuca sativa
Lsat_1_v5_gn_5_154920 2.0kb upstream 2.0kb upstream 10860   true Lsat_1_v8_lg_5: 293088988-293099847 Lactuca sativa
Lsat_1_v5_gn_5_154920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 293088988-293090987 Lactuca sativa
Lsat_1_v5_gn_5_154920 2.0kb downstream 2.0kb downstream 10860   true Lsat_1_v8_lg_5: 293090988-293101847 Lactuca sativa
Lsat_1_v5_gn_5_154920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 293099848-293101847 Lactuca sativa
Lsat_1_v5_gn_5_154920 5.0kb upstream 5.0kb upstream 13860   true Lsat_1_v8_lg_5: 293085988-293099847 Lactuca sativa
Lsat_1_v5_gn_5_154920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 293085988-293090987 Lactuca sativa
Lsat_1_v5_gn_5_154920 5.0kb downstream 5.0kb downstream 13860   true Lsat_1_v8_lg_5: 293090988-293104847 Lactuca sativa
Lsat_1_v5_gn_5_154920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 293099848-293104847 Lactuca sativa
Lsat_1_v5_gn_5_154920 10.0kb upstream 10.0kb upstream 18860   true Lsat_1_v8_lg_5: 293080988-293099847 Lactuca sativa
Lsat_1_v5_gn_5_154920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 293080988-293090987 Lactuca sativa
Lsat_1_v5_gn_5_154920 10.0kb downstream 10.0kb downstream 18860   true Lsat_1_v8_lg_5: 293090988-293109847 Lactuca sativa
Lsat_1_v5_gn_5_154920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 293099848-293109847 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480063 5263 Asterids View MSA
123736600 5271 Pentapetalae View MSA
122793293 5272 Eudicot View MSA
122047667 5273 Angiosperm View MSA
121345143 5274 Embryophyte View MSA
123426820 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain