Gene : Lsat_1_v5_gn_5_15861 L. sativa V8
Defline:  (1 of 6) K03696 - ATP-dependent Clp protease ATP-binding subunit ClpC (clpC) Genomic Order:  413
Name:  ? Lsat_1_v5_gn_5_15861 Secondary Identifier:  ? PAC:38963575
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_15861 0.5kb upstream 0.5kb upstream 3851   true Lsat_1_v8_lg_5: 32701542-32705392 Lactuca sativa
Lsat_1_v5_gn_5_15861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 32704893-32705392 Lactuca sativa
Lsat_1_v5_gn_5_15861 0.5kb downstream 0.5kb downstream 3851   true Lsat_1_v8_lg_5: 32701042-32704892 Lactuca sativa
Lsat_1_v5_gn_5_15861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 32701042-32701541 Lactuca sativa
Lsat_1_v5_gn_5_15861 1.0kb upstream 1.0kb upstream 4351   true Lsat_1_v8_lg_5: 32701542-32705892 Lactuca sativa
Lsat_1_v5_gn_5_15861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 32704893-32705892 Lactuca sativa
Lsat_1_v5_gn_5_15861 1.0kb downstream 1.0kb downstream 4351   true Lsat_1_v8_lg_5: 32700542-32704892 Lactuca sativa
Lsat_1_v5_gn_5_15861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 32700542-32701541 Lactuca sativa
Lsat_1_v5_gn_5_15861 2.0kb upstream 2.0kb upstream 5351   true Lsat_1_v8_lg_5: 32701542-32706892 Lactuca sativa
Lsat_1_v5_gn_5_15861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 32704893-32706892 Lactuca sativa
Lsat_1_v5_gn_5_15861 2.0kb downstream 2.0kb downstream 5351   true Lsat_1_v8_lg_5: 32699542-32704892 Lactuca sativa
Lsat_1_v5_gn_5_15861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 32699542-32701541 Lactuca sativa
Lsat_1_v5_gn_5_15861 5.0kb upstream 5.0kb upstream 8351   true Lsat_1_v8_lg_5: 32701542-32709892 Lactuca sativa
Lsat_1_v5_gn_5_15861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 32704893-32709892 Lactuca sativa
Lsat_1_v5_gn_5_15861 5.0kb downstream 5.0kb downstream 8351   true Lsat_1_v8_lg_5: 32696542-32704892 Lactuca sativa
Lsat_1_v5_gn_5_15861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 32696542-32701541 Lactuca sativa
Lsat_1_v5_gn_5_15861 10.0kb upstream 10.0kb upstream 13351   true Lsat_1_v8_lg_5: 32701542-32714892 Lactuca sativa
Lsat_1_v5_gn_5_15861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 32704893-32714892 Lactuca sativa
Lsat_1_v5_gn_5_15861 10.0kb downstream 10.0kb downstream 13351   true Lsat_1_v8_lg_5: 32691542-32704892 Lactuca sativa
Lsat_1_v5_gn_5_15861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 32691542-32701541 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481932 5263 Asterids View MSA
123738110 5271 Pentapetalae View MSA
122796801 5272 Eudicot View MSA
122047694 5273 Angiosperm View MSA
121345923 5274 Embryophyte View MSA
123426532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain