Gene : Lsat_1_v5_gn_5_157921 L. sativa V8
Defline:  (1 of 1) K06990 - uncharacterized protein (K06990) Genomic Order:  4168
Name:  ? Lsat_1_v5_gn_5_157921 Secondary Identifier:  ? PAC:38968539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_157921 0.5kb upstream 0.5kb upstream 3900   true Lsat_1_v8_lg_5: 289254997-289258896 Lactuca sativa
Lsat_1_v5_gn_5_157921 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 289254997-289255496 Lactuca sativa
Lsat_1_v5_gn_5_157921 0.5kb downstream 0.5kb downstream 3900   true Lsat_1_v8_lg_5: 289255497-289259396 Lactuca sativa
Lsat_1_v5_gn_5_157921 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 289258897-289259396 Lactuca sativa
Lsat_1_v5_gn_5_157921 1.0kb upstream 1.0kb upstream 4400   true Lsat_1_v8_lg_5: 289254497-289258896 Lactuca sativa
Lsat_1_v5_gn_5_157921 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 289254497-289255496 Lactuca sativa
Lsat_1_v5_gn_5_157921 1.0kb downstream 1.0kb downstream 4400   true Lsat_1_v8_lg_5: 289255497-289259896 Lactuca sativa
Lsat_1_v5_gn_5_157921 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 289258897-289259896 Lactuca sativa
Lsat_1_v5_gn_5_157921 2.0kb upstream 2.0kb upstream 5400   true Lsat_1_v8_lg_5: 289253497-289258896 Lactuca sativa
Lsat_1_v5_gn_5_157921 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 289253497-289255496 Lactuca sativa
Lsat_1_v5_gn_5_157921 2.0kb downstream 2.0kb downstream 5400   true Lsat_1_v8_lg_5: 289255497-289260896 Lactuca sativa
Lsat_1_v5_gn_5_157921 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 289258897-289260896 Lactuca sativa
Lsat_1_v5_gn_5_157921 5.0kb upstream 5.0kb upstream 8400   true Lsat_1_v8_lg_5: 289250497-289258896 Lactuca sativa
Lsat_1_v5_gn_5_157921 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 289250497-289255496 Lactuca sativa
Lsat_1_v5_gn_5_157921 5.0kb downstream 5.0kb downstream 8400   true Lsat_1_v8_lg_5: 289255497-289263896 Lactuca sativa
Lsat_1_v5_gn_5_157921 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 289258897-289263896 Lactuca sativa
Lsat_1_v5_gn_5_157921 10.0kb upstream 10.0kb upstream 13400   true Lsat_1_v8_lg_5: 289245497-289258896 Lactuca sativa
Lsat_1_v5_gn_5_157921 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 289245497-289255496 Lactuca sativa
Lsat_1_v5_gn_5_157921 10.0kb downstream 10.0kb downstream 13400   true Lsat_1_v8_lg_5: 289255497-289268896 Lactuca sativa
Lsat_1_v5_gn_5_157921 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 289258897-289268896 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471943 5263 Asterids View MSA
123739302 5271 Pentapetalae View MSA
122792627 5272 Eudicot View MSA
122043958 5273 Angiosperm View MSA
121344189 5274 Embryophyte View MSA
123424633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain