Gene : Lsat_1_v5_gn_5_159920 L. sativa V8
Defline:  (1 of 3) PTHR10891//PTHR10891:SF590 - EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4360
Name:  ? Lsat_1_v5_gn_5_159920 Secondary Identifier:  ? PAC:38964828
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_159920 0.5kb upstream 0.5kb upstream 1419   true Lsat_1_v8_lg_5: 298647198-298648616 Lactuca sativa
Lsat_1_v5_gn_5_159920 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 298648117-298648616 Lactuca sativa
Lsat_1_v5_gn_5_159920 0.5kb downstream 0.5kb downstream 1419   true Lsat_1_v8_lg_5: 298646698-298648116 Lactuca sativa
Lsat_1_v5_gn_5_159920 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 298646698-298647197 Lactuca sativa
Lsat_1_v5_gn_5_159920 1.0kb upstream 1.0kb upstream 1919   true Lsat_1_v8_lg_5: 298647198-298649116 Lactuca sativa
Lsat_1_v5_gn_5_159920 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 298648117-298649116 Lactuca sativa
Lsat_1_v5_gn_5_159920 1.0kb downstream 1.0kb downstream 1919   true Lsat_1_v8_lg_5: 298646198-298648116 Lactuca sativa
Lsat_1_v5_gn_5_159920 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 298646198-298647197 Lactuca sativa
Lsat_1_v5_gn_5_159920 2.0kb upstream 2.0kb upstream 2919   true Lsat_1_v8_lg_5: 298647198-298650116 Lactuca sativa
Lsat_1_v5_gn_5_159920 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 298648117-298650116 Lactuca sativa
Lsat_1_v5_gn_5_159920 2.0kb downstream 2.0kb downstream 2919   true Lsat_1_v8_lg_5: 298645198-298648116 Lactuca sativa
Lsat_1_v5_gn_5_159920 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 298645198-298647197 Lactuca sativa
Lsat_1_v5_gn_5_159920 5.0kb upstream 5.0kb upstream 5919   true Lsat_1_v8_lg_5: 298647198-298653116 Lactuca sativa
Lsat_1_v5_gn_5_159920 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 298648117-298653116 Lactuca sativa
Lsat_1_v5_gn_5_159920 5.0kb downstream 5.0kb downstream 5919   true Lsat_1_v8_lg_5: 298642198-298648116 Lactuca sativa
Lsat_1_v5_gn_5_159920 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 298642198-298647197 Lactuca sativa
Lsat_1_v5_gn_5_159920 10.0kb upstream 10.0kb upstream 10919   true Lsat_1_v8_lg_5: 298647198-298658116 Lactuca sativa
Lsat_1_v5_gn_5_159920 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 298648117-298658116 Lactuca sativa
Lsat_1_v5_gn_5_159920 10.0kb downstream 10.0kb downstream 10919   true Lsat_1_v8_lg_5: 298637198-298648116 Lactuca sativa
Lsat_1_v5_gn_5_159920 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 298637198-298647197 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476166 5263 Asterids View MSA
123739522 5271 Pentapetalae View MSA
122793851 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain