Gene : Lsat_1_v5_gn_5_45900 L. sativa V8
Defline:  (1 of 2) K00281 - glycine dehydrogenase (GLDC, gcvP) Genomic Order:  1200
Name:  ? Lsat_1_v5_gn_5_45900 Secondary Identifier:  ? PAC:38967941
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLYCLEAV-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_45900 0.5kb upstream 0.5kb upstream 7081   true Lsat_1_v8_lg_5: 98935960-98943040 Lactuca sativa
Lsat_1_v5_gn_5_45900 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 98935960-98936459 Lactuca sativa
Lsat_1_v5_gn_5_45900 0.5kb downstream 0.5kb downstream 7081   true Lsat_1_v8_lg_5: 98936460-98943540 Lactuca sativa
Lsat_1_v5_gn_5_45900 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 98943041-98943540 Lactuca sativa
Lsat_1_v5_gn_5_45900 1.0kb upstream 1.0kb upstream 7581   true Lsat_1_v8_lg_5: 98935460-98943040 Lactuca sativa
Lsat_1_v5_gn_5_45900 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 98935460-98936459 Lactuca sativa
Lsat_1_v5_gn_5_45900 1.0kb downstream 1.0kb downstream 7581   true Lsat_1_v8_lg_5: 98936460-98944040 Lactuca sativa
Lsat_1_v5_gn_5_45900 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 98943041-98944040 Lactuca sativa
Lsat_1_v5_gn_5_45900 2.0kb upstream 2.0kb upstream 8581   true Lsat_1_v8_lg_5: 98934460-98943040 Lactuca sativa
Lsat_1_v5_gn_5_45900 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 98934460-98936459 Lactuca sativa
Lsat_1_v5_gn_5_45900 2.0kb downstream 2.0kb downstream 8581   true Lsat_1_v8_lg_5: 98936460-98945040 Lactuca sativa
Lsat_1_v5_gn_5_45900 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 98943041-98945040 Lactuca sativa
Lsat_1_v5_gn_5_45900 5.0kb upstream 5.0kb upstream 11581   true Lsat_1_v8_lg_5: 98931460-98943040 Lactuca sativa
Lsat_1_v5_gn_5_45900 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 98931460-98936459 Lactuca sativa
Lsat_1_v5_gn_5_45900 5.0kb downstream 5.0kb downstream 11581   true Lsat_1_v8_lg_5: 98936460-98948040 Lactuca sativa
Lsat_1_v5_gn_5_45900 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 98943041-98948040 Lactuca sativa
Lsat_1_v5_gn_5_45900 10.0kb upstream 10.0kb upstream 16581   true Lsat_1_v8_lg_5: 98926460-98943040 Lactuca sativa
Lsat_1_v5_gn_5_45900 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 98926460-98936459 Lactuca sativa
Lsat_1_v5_gn_5_45900 10.0kb downstream 10.0kb downstream 16581   true Lsat_1_v8_lg_5: 98936460-98953040 Lactuca sativa
Lsat_1_v5_gn_5_45900 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 98943041-98953040 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464836 5263 Asterids View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain