Gene : Lsat_1_v5_gn_5_45800 L. sativa V8
Defline:  (1 of 2) PTHR24322:SF510 - ALCOHOL DEHYDROGENASE (ATA1) Genomic Order:  1259
Name:  ? Lsat_1_v5_gn_5_45800 Secondary Identifier:  ? PAC:38969508
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-695 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_45800 0.5kb upstream 0.5kb upstream 9728   true Lsat_1_v8_lg_5: 108778439-108788166 Lactuca sativa
Lsat_1_v5_gn_5_45800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 108778439-108778938 Lactuca sativa
Lsat_1_v5_gn_5_45800 0.5kb downstream 0.5kb downstream 9728   true Lsat_1_v8_lg_5: 108778939-108788666 Lactuca sativa
Lsat_1_v5_gn_5_45800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 108788167-108788666 Lactuca sativa
Lsat_1_v5_gn_5_45800 1.0kb upstream 1.0kb upstream 10228   true Lsat_1_v8_lg_5: 108777939-108788166 Lactuca sativa
Lsat_1_v5_gn_5_45800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 108777939-108778938 Lactuca sativa
Lsat_1_v5_gn_5_45800 1.0kb downstream 1.0kb downstream 10228   true Lsat_1_v8_lg_5: 108778939-108789166 Lactuca sativa
Lsat_1_v5_gn_5_45800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 108788167-108789166 Lactuca sativa
Lsat_1_v5_gn_5_45800 2.0kb upstream 2.0kb upstream 11228   true Lsat_1_v8_lg_5: 108776939-108788166 Lactuca sativa
Lsat_1_v5_gn_5_45800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 108776939-108778938 Lactuca sativa
Lsat_1_v5_gn_5_45800 2.0kb downstream 2.0kb downstream 11228   true Lsat_1_v8_lg_5: 108778939-108790166 Lactuca sativa
Lsat_1_v5_gn_5_45800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 108788167-108790166 Lactuca sativa
Lsat_1_v5_gn_5_45800 5.0kb upstream 5.0kb upstream 14228   true Lsat_1_v8_lg_5: 108773939-108788166 Lactuca sativa
Lsat_1_v5_gn_5_45800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 108773939-108778938 Lactuca sativa
Lsat_1_v5_gn_5_45800 5.0kb downstream 5.0kb downstream 14228   true Lsat_1_v8_lg_5: 108778939-108793166 Lactuca sativa
Lsat_1_v5_gn_5_45800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 108788167-108793166 Lactuca sativa
Lsat_1_v5_gn_5_45800 10.0kb upstream 10.0kb upstream 19228   true Lsat_1_v8_lg_5: 108768939-108788166 Lactuca sativa
Lsat_1_v5_gn_5_45800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 108768939-108778938 Lactuca sativa
Lsat_1_v5_gn_5_45800 10.0kb downstream 10.0kb downstream 19228   true Lsat_1_v8_lg_5: 108778939-108798166 Lactuca sativa
Lsat_1_v5_gn_5_45800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 108788167-108798166 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121452197 5263 Asterids View MSA
123748267 5271 Pentapetalae View MSA
122788265 5272 Eudicot View MSA
122042997 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121351668 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain