Gene : Lsat_1_v5_gn_5_50360 L. sativa V8
Defline:  (1 of 4) K02635 - cytochrome b6 (petB) Genomic Order:  1313
Name:  ? Lsat_1_v5_gn_5_50360 Secondary Identifier:  ? PAC:38967356
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_50360 0.5kb upstream 0.5kb upstream 1279   true Lsat_1_v8_lg_5: 113488195-113489473 Lactuca sativa
Lsat_1_v5_gn_5_50360 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 113488974-113489473 Lactuca sativa
Lsat_1_v5_gn_5_50360 0.5kb downstream 0.5kb downstream 1279   true Lsat_1_v8_lg_5: 113487695-113488973 Lactuca sativa
Lsat_1_v5_gn_5_50360 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 113487695-113488194 Lactuca sativa
Lsat_1_v5_gn_5_50360 1.0kb upstream 1.0kb upstream 1779   true Lsat_1_v8_lg_5: 113488195-113489973 Lactuca sativa
Lsat_1_v5_gn_5_50360 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 113488974-113489973 Lactuca sativa
Lsat_1_v5_gn_5_50360 1.0kb downstream 1.0kb downstream 1779   true Lsat_1_v8_lg_5: 113487195-113488973 Lactuca sativa
Lsat_1_v5_gn_5_50360 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 113487195-113488194 Lactuca sativa
Lsat_1_v5_gn_5_50360 2.0kb upstream 2.0kb upstream 2779   true Lsat_1_v8_lg_5: 113488195-113490973 Lactuca sativa
Lsat_1_v5_gn_5_50360 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 113488974-113490973 Lactuca sativa
Lsat_1_v5_gn_5_50360 2.0kb downstream 2.0kb downstream 2779   true Lsat_1_v8_lg_5: 113486195-113488973 Lactuca sativa
Lsat_1_v5_gn_5_50360 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 113486195-113488194 Lactuca sativa
Lsat_1_v5_gn_5_50360 5.0kb upstream 5.0kb upstream 5779   true Lsat_1_v8_lg_5: 113488195-113493973 Lactuca sativa
Lsat_1_v5_gn_5_50360 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 113488974-113493973 Lactuca sativa
Lsat_1_v5_gn_5_50360 5.0kb downstream 5.0kb downstream 5779   true Lsat_1_v8_lg_5: 113483195-113488973 Lactuca sativa
Lsat_1_v5_gn_5_50360 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 113483195-113488194 Lactuca sativa
Lsat_1_v5_gn_5_50360 10.0kb upstream 10.0kb upstream 10779   true Lsat_1_v8_lg_5: 113488195-113498973 Lactuca sativa
Lsat_1_v5_gn_5_50360 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 113488974-113498973 Lactuca sativa
Lsat_1_v5_gn_5_50360 10.0kb downstream 10.0kb downstream 10779   true Lsat_1_v8_lg_5: 113478195-113488973 Lactuca sativa
Lsat_1_v5_gn_5_50360 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 113478195-113488194 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478321 5263 Asterids View MSA
123751133 5271 Pentapetalae View MSA
122795753 5272 Eudicot View MSA
122050945 5273 Angiosperm View MSA
123428978 5275 Viridiplantae View MSA
121350678 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain