Gene : Lsat_1_v5_gn_5_5400 L. sativa V8
Defline:  (1 of 4) K03809 - NAD(P)H dehydrogenase (quinone) (wrbA) Genomic Order:  169
Name:  ? Lsat_1_v5_gn_5_5400 Secondary Identifier:  ? PAC:38965766
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7279 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_5400 0.5kb upstream 0.5kb upstream 4382   true Lsat_1_v8_lg_5: 11604893-11609274 Lactuca sativa
Lsat_1_v5_gn_5_5400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 11608775-11609274 Lactuca sativa
Lsat_1_v5_gn_5_5400 0.5kb downstream 0.5kb downstream 4382   true Lsat_1_v8_lg_5: 11604393-11608774 Lactuca sativa
Lsat_1_v5_gn_5_5400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 11604393-11604892 Lactuca sativa
Lsat_1_v5_gn_5_5400 1.0kb upstream 1.0kb upstream 4882   true Lsat_1_v8_lg_5: 11604893-11609774 Lactuca sativa
Lsat_1_v5_gn_5_5400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 11608775-11609774 Lactuca sativa
Lsat_1_v5_gn_5_5400 1.0kb downstream 1.0kb downstream 4882   true Lsat_1_v8_lg_5: 11603893-11608774 Lactuca sativa
Lsat_1_v5_gn_5_5400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 11603893-11604892 Lactuca sativa
Lsat_1_v5_gn_5_5400 2.0kb upstream 2.0kb upstream 5882   true Lsat_1_v8_lg_5: 11604893-11610774 Lactuca sativa
Lsat_1_v5_gn_5_5400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 11608775-11610774 Lactuca sativa
Lsat_1_v5_gn_5_5400 2.0kb downstream 2.0kb downstream 5882   true Lsat_1_v8_lg_5: 11602893-11608774 Lactuca sativa
Lsat_1_v5_gn_5_5400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 11602893-11604892 Lactuca sativa
Lsat_1_v5_gn_5_5400 5.0kb upstream 5.0kb upstream 8882   true Lsat_1_v8_lg_5: 11604893-11613774 Lactuca sativa
Lsat_1_v5_gn_5_5400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 11608775-11613774 Lactuca sativa
Lsat_1_v5_gn_5_5400 5.0kb downstream 5.0kb downstream 8882   true Lsat_1_v8_lg_5: 11599893-11608774 Lactuca sativa
Lsat_1_v5_gn_5_5400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 11599893-11604892 Lactuca sativa
Lsat_1_v5_gn_5_5400 10.0kb upstream 10.0kb upstream 13882   true Lsat_1_v8_lg_5: 11604893-11618774 Lactuca sativa
Lsat_1_v5_gn_5_5400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 11608775-11618774 Lactuca sativa
Lsat_1_v5_gn_5_5400 10.0kb downstream 10.0kb downstream 13882   true Lsat_1_v8_lg_5: 11594893-11608774 Lactuca sativa
Lsat_1_v5_gn_5_5400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 11594893-11604892 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477041 5263 Asterids View MSA
123752194 5271 Pentapetalae View MSA
122789717 5272 Eudicot View MSA
122045410 5273 Angiosperm View MSA
121349391 5274 Embryophyte View MSA
123428089 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain