Gene : Lsat_1_v5_gn_5_190601 L. sativa V8
Defline:  (1 of 1) K10858 - DNA mismatch repair protein PMS2 (PMS2) Genomic Order:  5302
Name:  ? Lsat_1_v5_gn_5_190601 Secondary Identifier:  ? PAC:38967190
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_190601 0.5kb upstream 0.5kb upstream 5808   true Lsat_1_v8_lg_5: 339509858-339515665 Lactuca sativa
Lsat_1_v5_gn_5_190601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 339509858-339510357 Lactuca sativa
Lsat_1_v5_gn_5_190601 0.5kb downstream 0.5kb downstream 5808   true Lsat_1_v8_lg_5: 339510358-339516165 Lactuca sativa
Lsat_1_v5_gn_5_190601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 339515666-339516165 Lactuca sativa
Lsat_1_v5_gn_5_190601 1.0kb upstream 1.0kb upstream 6308   true Lsat_1_v8_lg_5: 339509358-339515665 Lactuca sativa
Lsat_1_v5_gn_5_190601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 339509358-339510357 Lactuca sativa
Lsat_1_v5_gn_5_190601 1.0kb downstream 1.0kb downstream 6308   true Lsat_1_v8_lg_5: 339510358-339516665 Lactuca sativa
Lsat_1_v5_gn_5_190601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 339515666-339516665 Lactuca sativa
Lsat_1_v5_gn_5_190601 2.0kb upstream 2.0kb upstream 7308   true Lsat_1_v8_lg_5: 339508358-339515665 Lactuca sativa
Lsat_1_v5_gn_5_190601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 339508358-339510357 Lactuca sativa
Lsat_1_v5_gn_5_190601 2.0kb downstream 2.0kb downstream 7308   true Lsat_1_v8_lg_5: 339510358-339517665 Lactuca sativa
Lsat_1_v5_gn_5_190601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 339515666-339517665 Lactuca sativa
Lsat_1_v5_gn_5_190601 5.0kb upstream 5.0kb upstream 10308   true Lsat_1_v8_lg_5: 339505358-339515665 Lactuca sativa
Lsat_1_v5_gn_5_190601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 339505358-339510357 Lactuca sativa
Lsat_1_v5_gn_5_190601 5.0kb downstream 5.0kb downstream 10308   true Lsat_1_v8_lg_5: 339510358-339520665 Lactuca sativa
Lsat_1_v5_gn_5_190601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 339515666-339520665 Lactuca sativa
Lsat_1_v5_gn_5_190601 10.0kb upstream 10.0kb upstream 15308   true Lsat_1_v8_lg_5: 339500358-339515665 Lactuca sativa
Lsat_1_v5_gn_5_190601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 339500358-339510357 Lactuca sativa
Lsat_1_v5_gn_5_190601 10.0kb downstream 10.0kb downstream 15308   true Lsat_1_v8_lg_5: 339510358-339525665 Lactuca sativa
Lsat_1_v5_gn_5_190601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 339515666-339525665 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472431 5263 Asterids View MSA
123747689 5271 Pentapetalae View MSA
122789858 5272 Eudicot View MSA
122044481 5273 Angiosperm View MSA
121344102 5274 Embryophyte View MSA
123426273 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain