Gene : Lsat_1_v5_gn_5_23020 L. sativa V8
Defline:  (1 of 7) PF01805 - Surp module (Surp) Genomic Order:  637
Name:  ? Lsat_1_v5_gn_5_23020 Secondary Identifier:  ? PAC:38970720
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_23020 0.5kb upstream 0.5kb upstream 4957   true Lsat_1_v8_lg_5: 46698942-46703898 Lactuca sativa
Lsat_1_v5_gn_5_23020 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 46703399-46703898 Lactuca sativa
Lsat_1_v5_gn_5_23020 0.5kb downstream 0.5kb downstream 4957   true Lsat_1_v8_lg_5: 46698442-46703398 Lactuca sativa
Lsat_1_v5_gn_5_23020 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 46698442-46698941 Lactuca sativa
Lsat_1_v5_gn_5_23020 1.0kb upstream 1.0kb upstream 5457   true Lsat_1_v8_lg_5: 46698942-46704398 Lactuca sativa
Lsat_1_v5_gn_5_23020 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 46703399-46704398 Lactuca sativa
Lsat_1_v5_gn_5_23020 1.0kb downstream 1.0kb downstream 5457   true Lsat_1_v8_lg_5: 46697942-46703398 Lactuca sativa
Lsat_1_v5_gn_5_23020 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 46697942-46698941 Lactuca sativa
Lsat_1_v5_gn_5_23020 2.0kb upstream 2.0kb upstream 6457   true Lsat_1_v8_lg_5: 46698942-46705398 Lactuca sativa
Lsat_1_v5_gn_5_23020 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 46703399-46705398 Lactuca sativa
Lsat_1_v5_gn_5_23020 2.0kb downstream 2.0kb downstream 6457   true Lsat_1_v8_lg_5: 46696942-46703398 Lactuca sativa
Lsat_1_v5_gn_5_23020 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 46696942-46698941 Lactuca sativa
Lsat_1_v5_gn_5_23020 5.0kb upstream 5.0kb upstream 9457   true Lsat_1_v8_lg_5: 46698942-46708398 Lactuca sativa
Lsat_1_v5_gn_5_23020 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 46703399-46708398 Lactuca sativa
Lsat_1_v5_gn_5_23020 5.0kb downstream 5.0kb downstream 9457   true Lsat_1_v8_lg_5: 46693942-46703398 Lactuca sativa
Lsat_1_v5_gn_5_23020 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 46693942-46698941 Lactuca sativa
Lsat_1_v5_gn_5_23020 10.0kb upstream 10.0kb upstream 14457   true Lsat_1_v8_lg_5: 46698942-46713398 Lactuca sativa
Lsat_1_v5_gn_5_23020 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 46703399-46713398 Lactuca sativa
Lsat_1_v5_gn_5_23020 10.0kb downstream 10.0kb downstream 14457   true Lsat_1_v8_lg_5: 46688942-46703398 Lactuca sativa
Lsat_1_v5_gn_5_23020 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 46688942-46698941 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470587 5263 Asterids View MSA
123751818 5271 Pentapetalae View MSA
122794753 5272 Eudicot View MSA
122049503 5273 Angiosperm View MSA
121348511 5274 Embryophyte View MSA
123426548 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain