Gene : Lsat_1_v5_gn_5_3060 L. sativa V8
Defline:  (1 of 1) K12606 - CCR4-NOT transcription complex subunit 9 (RCD1, CNOT9, CAF40) Genomic Order:  94
Name:  ? Lsat_1_v5_gn_5_3060 Secondary Identifier:  ? PAC:38969467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_3060 0.5kb upstream 0.5kb upstream 3589   true Lsat_1_v8_lg_5: 5933587-5937175 Lactuca sativa
Lsat_1_v5_gn_5_3060 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 5936676-5937175 Lactuca sativa
Lsat_1_v5_gn_5_3060 0.5kb downstream 0.5kb downstream 3589   true Lsat_1_v8_lg_5: 5933087-5936675 Lactuca sativa
Lsat_1_v5_gn_5_3060 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 5933087-5933586 Lactuca sativa
Lsat_1_v5_gn_5_3060 1.0kb upstream 1.0kb upstream 4089   true Lsat_1_v8_lg_5: 5933587-5937675 Lactuca sativa
Lsat_1_v5_gn_5_3060 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 5936676-5937675 Lactuca sativa
Lsat_1_v5_gn_5_3060 1.0kb downstream 1.0kb downstream 4089   true Lsat_1_v8_lg_5: 5932587-5936675 Lactuca sativa
Lsat_1_v5_gn_5_3060 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 5932587-5933586 Lactuca sativa
Lsat_1_v5_gn_5_3060 2.0kb upstream 2.0kb upstream 5089   true Lsat_1_v8_lg_5: 5933587-5938675 Lactuca sativa
Lsat_1_v5_gn_5_3060 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 5936676-5938675 Lactuca sativa
Lsat_1_v5_gn_5_3060 2.0kb downstream 2.0kb downstream 5089   true Lsat_1_v8_lg_5: 5931587-5936675 Lactuca sativa
Lsat_1_v5_gn_5_3060 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 5931587-5933586 Lactuca sativa
Lsat_1_v5_gn_5_3060 5.0kb upstream 5.0kb upstream 8089   true Lsat_1_v8_lg_5: 5933587-5941675 Lactuca sativa
Lsat_1_v5_gn_5_3060 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 5936676-5941675 Lactuca sativa
Lsat_1_v5_gn_5_3060 5.0kb downstream 5.0kb downstream 8089   true Lsat_1_v8_lg_5: 5928587-5936675 Lactuca sativa
Lsat_1_v5_gn_5_3060 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 5928587-5933586 Lactuca sativa
Lsat_1_v5_gn_5_3060 10.0kb upstream 10.0kb upstream 13089   true Lsat_1_v8_lg_5: 5933587-5946675 Lactuca sativa
Lsat_1_v5_gn_5_3060 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 5936676-5946675 Lactuca sativa
Lsat_1_v5_gn_5_3060 10.0kb downstream 10.0kb downstream 13089   true Lsat_1_v8_lg_5: 5923587-5936675 Lactuca sativa
Lsat_1_v5_gn_5_3060 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 5923587-5933586 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474910 5263 Asterids View MSA
123748122 5271 Pentapetalae View MSA
122792853 5272 Eudicot View MSA
122043480 5273 Angiosperm View MSA
121346204 5274 Embryophyte View MSA
123424774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain