Gene : Lsat_1_v5_gn_5_78420 L. sativa V8
Defline:  (1 of 2) PTHR12277:SF58 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  2051
Name:  ? Lsat_1_v5_gn_5_78420 Secondary Identifier:  ? PAC:38970343
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_78420 0.5kb upstream 0.5kb upstream 6706   true Lsat_1_v8_lg_5: 176465417-176472122 Lactuca sativa
Lsat_1_v5_gn_5_78420 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 176465417-176465916 Lactuca sativa
Lsat_1_v5_gn_5_78420 0.5kb downstream 0.5kb downstream 6706   true Lsat_1_v8_lg_5: 176465917-176472622 Lactuca sativa
Lsat_1_v5_gn_5_78420 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 176472123-176472622 Lactuca sativa
Lsat_1_v5_gn_5_78420 1.0kb upstream 1.0kb upstream 7206   true Lsat_1_v8_lg_5: 176464917-176472122 Lactuca sativa
Lsat_1_v5_gn_5_78420 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 176464917-176465916 Lactuca sativa
Lsat_1_v5_gn_5_78420 1.0kb downstream 1.0kb downstream 7206   true Lsat_1_v8_lg_5: 176465917-176473122 Lactuca sativa
Lsat_1_v5_gn_5_78420 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 176472123-176473122 Lactuca sativa
Lsat_1_v5_gn_5_78420 2.0kb upstream 2.0kb upstream 8206   true Lsat_1_v8_lg_5: 176463917-176472122 Lactuca sativa
Lsat_1_v5_gn_5_78420 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 176463917-176465916 Lactuca sativa
Lsat_1_v5_gn_5_78420 2.0kb downstream 2.0kb downstream 8206   true Lsat_1_v8_lg_5: 176465917-176474122 Lactuca sativa
Lsat_1_v5_gn_5_78420 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 176472123-176474122 Lactuca sativa
Lsat_1_v5_gn_5_78420 5.0kb upstream 5.0kb upstream 11206   true Lsat_1_v8_lg_5: 176460917-176472122 Lactuca sativa
Lsat_1_v5_gn_5_78420 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 176460917-176465916 Lactuca sativa
Lsat_1_v5_gn_5_78420 5.0kb downstream 5.0kb downstream 11206   true Lsat_1_v8_lg_5: 176465917-176477122 Lactuca sativa
Lsat_1_v5_gn_5_78420 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 176472123-176477122 Lactuca sativa
Lsat_1_v5_gn_5_78420 10.0kb upstream 10.0kb upstream 16206   true Lsat_1_v8_lg_5: 176455917-176472122 Lactuca sativa
Lsat_1_v5_gn_5_78420 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 176455917-176465916 Lactuca sativa
Lsat_1_v5_gn_5_78420 10.0kb downstream 10.0kb downstream 16206   true Lsat_1_v8_lg_5: 176465917-176482122 Lactuca sativa
Lsat_1_v5_gn_5_78420 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 176472123-176482122 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475595 5263 Asterids View MSA
123753739 5271 Pentapetalae View MSA
122791791 5272 Eudicot View MSA
122047952 5273 Angiosperm View MSA
121347410 5274 Embryophyte View MSA
123427961 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain