Gene : Lsat_1_v5_gn_5_80620 L. sativa V8
Defline:  (1 of 1) PTHR12225 - ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN Genomic Order:  2155
Name:  ? Lsat_1_v5_gn_5_80620 Secondary Identifier:  ? PAC:38968502
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_80620 0.5kb upstream 0.5kb upstream 5087   true Lsat_1_v8_lg_5: 184108976-184114062 Lactuca sativa
Lsat_1_v5_gn_5_80620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 184113563-184114062 Lactuca sativa
Lsat_1_v5_gn_5_80620 0.5kb downstream 0.5kb downstream 5087   true Lsat_1_v8_lg_5: 184108476-184113562 Lactuca sativa
Lsat_1_v5_gn_5_80620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 184108476-184108975 Lactuca sativa
Lsat_1_v5_gn_5_80620 1.0kb upstream 1.0kb upstream 5587   true Lsat_1_v8_lg_5: 184108976-184114562 Lactuca sativa
Lsat_1_v5_gn_5_80620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 184113563-184114562 Lactuca sativa
Lsat_1_v5_gn_5_80620 1.0kb downstream 1.0kb downstream 5587   true Lsat_1_v8_lg_5: 184107976-184113562 Lactuca sativa
Lsat_1_v5_gn_5_80620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 184107976-184108975 Lactuca sativa
Lsat_1_v5_gn_5_80620 2.0kb upstream 2.0kb upstream 6587   true Lsat_1_v8_lg_5: 184108976-184115562 Lactuca sativa
Lsat_1_v5_gn_5_80620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 184113563-184115562 Lactuca sativa
Lsat_1_v5_gn_5_80620 2.0kb downstream 2.0kb downstream 6587   true Lsat_1_v8_lg_5: 184106976-184113562 Lactuca sativa
Lsat_1_v5_gn_5_80620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 184106976-184108975 Lactuca sativa
Lsat_1_v5_gn_5_80620 5.0kb upstream 5.0kb upstream 9587   true Lsat_1_v8_lg_5: 184108976-184118562 Lactuca sativa
Lsat_1_v5_gn_5_80620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 184113563-184118562 Lactuca sativa
Lsat_1_v5_gn_5_80620 5.0kb downstream 5.0kb downstream 9587   true Lsat_1_v8_lg_5: 184103976-184113562 Lactuca sativa
Lsat_1_v5_gn_5_80620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 184103976-184108975 Lactuca sativa
Lsat_1_v5_gn_5_80620 10.0kb upstream 10.0kb upstream 14587   true Lsat_1_v8_lg_5: 184108976-184123562 Lactuca sativa
Lsat_1_v5_gn_5_80620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 184113563-184123562 Lactuca sativa
Lsat_1_v5_gn_5_80620 10.0kb downstream 10.0kb downstream 14587   true Lsat_1_v8_lg_5: 184098976-184113562 Lactuca sativa
Lsat_1_v5_gn_5_80620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 184098976-184108975 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041235 5273 Angiosperm View MSA
121468766 5263 Asterids View MSA
123746054 5271 Pentapetalae View MSA
122790240 5272 Eudicot View MSA
121344087 5274 Embryophyte View MSA
123425149 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain