Gene : Lsat_1_v5_gn_5_83400 L. sativa V8
Defline:  (1 of 7) 5.3.2.1 - Phenylpyruvate tautomerase / Phenylpyruvic keto--enol isomerase Genomic Order:  2181
Name:  ? Lsat_1_v5_gn_5_83400 Secondary Identifier:  ? PAC:38970744
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6498 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_83400 0.5kb upstream 0.5kb upstream 5793   true Lsat_1_v8_lg_5: 186816085-186821877 Lactuca sativa
Lsat_1_v5_gn_5_83400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 186816085-186816584 Lactuca sativa
Lsat_1_v5_gn_5_83400 0.5kb downstream 0.5kb downstream 5793   true Lsat_1_v8_lg_5: 186816585-186822377 Lactuca sativa
Lsat_1_v5_gn_5_83400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 186821878-186822377 Lactuca sativa
Lsat_1_v5_gn_5_83400 1.0kb upstream 1.0kb upstream 6293   true Lsat_1_v8_lg_5: 186815585-186821877 Lactuca sativa
Lsat_1_v5_gn_5_83400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 186815585-186816584 Lactuca sativa
Lsat_1_v5_gn_5_83400 1.0kb downstream 1.0kb downstream 6293   true Lsat_1_v8_lg_5: 186816585-186822877 Lactuca sativa
Lsat_1_v5_gn_5_83400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 186821878-186822877 Lactuca sativa
Lsat_1_v5_gn_5_83400 2.0kb upstream 2.0kb upstream 7293   true Lsat_1_v8_lg_5: 186814585-186821877 Lactuca sativa
Lsat_1_v5_gn_5_83400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 186814585-186816584 Lactuca sativa
Lsat_1_v5_gn_5_83400 2.0kb downstream 2.0kb downstream 7293   true Lsat_1_v8_lg_5: 186816585-186823877 Lactuca sativa
Lsat_1_v5_gn_5_83400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 186821878-186823877 Lactuca sativa
Lsat_1_v5_gn_5_83400 5.0kb upstream 5.0kb upstream 10293   true Lsat_1_v8_lg_5: 186811585-186821877 Lactuca sativa
Lsat_1_v5_gn_5_83400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 186811585-186816584 Lactuca sativa
Lsat_1_v5_gn_5_83400 5.0kb downstream 5.0kb downstream 10293   true Lsat_1_v8_lg_5: 186816585-186826877 Lactuca sativa
Lsat_1_v5_gn_5_83400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 186821878-186826877 Lactuca sativa
Lsat_1_v5_gn_5_83400 10.0kb upstream 10.0kb upstream 15293   true Lsat_1_v8_lg_5: 186806585-186821877 Lactuca sativa
Lsat_1_v5_gn_5_83400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 186806585-186816584 Lactuca sativa
Lsat_1_v5_gn_5_83400 10.0kb downstream 10.0kb downstream 15293   true Lsat_1_v8_lg_5: 186816585-186831877 Lactuca sativa
Lsat_1_v5_gn_5_83400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 186821878-186831877 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474875 5263 Asterids View MSA
123740780 5271 Pentapetalae View MSA
122787200 5272 Eudicot View MSA
122044871 5273 Angiosperm View MSA
121349175 5274 Embryophyte View MSA
123424544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain