Gene : Lsat_1_v5_gn_5_6601 L. sativa V8
Defline:  (1 of 5) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  214
Name:  ? Lsat_1_v5_gn_5_6601 Secondary Identifier:  ? PAC:38967171
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_6601 0.5kb upstream 0.5kb upstream 12629   true Lsat_1_v8_lg_5: 14496581-14509209 Lactuca sativa
Lsat_1_v5_gn_5_6601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 14508710-14509209 Lactuca sativa
Lsat_1_v5_gn_5_6601 0.5kb downstream 0.5kb downstream 12629   true Lsat_1_v8_lg_5: 14496081-14508709 Lactuca sativa
Lsat_1_v5_gn_5_6601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 14496081-14496580 Lactuca sativa
Lsat_1_v5_gn_5_6601 1.0kb upstream 1.0kb upstream 13129   true Lsat_1_v8_lg_5: 14496581-14509709 Lactuca sativa
Lsat_1_v5_gn_5_6601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 14508710-14509709 Lactuca sativa
Lsat_1_v5_gn_5_6601 1.0kb downstream 1.0kb downstream 13129   true Lsat_1_v8_lg_5: 14495581-14508709 Lactuca sativa
Lsat_1_v5_gn_5_6601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 14495581-14496580 Lactuca sativa
Lsat_1_v5_gn_5_6601 2.0kb upstream 2.0kb upstream 14129   true Lsat_1_v8_lg_5: 14496581-14510709 Lactuca sativa
Lsat_1_v5_gn_5_6601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 14508710-14510709 Lactuca sativa
Lsat_1_v5_gn_5_6601 2.0kb downstream 2.0kb downstream 14129   true Lsat_1_v8_lg_5: 14494581-14508709 Lactuca sativa
Lsat_1_v5_gn_5_6601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 14494581-14496580 Lactuca sativa
Lsat_1_v5_gn_5_6601 5.0kb upstream 5.0kb upstream 17129   true Lsat_1_v8_lg_5: 14496581-14513709 Lactuca sativa
Lsat_1_v5_gn_5_6601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 14508710-14513709 Lactuca sativa
Lsat_1_v5_gn_5_6601 5.0kb downstream 5.0kb downstream 17129   true Lsat_1_v8_lg_5: 14491581-14508709 Lactuca sativa
Lsat_1_v5_gn_5_6601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 14491581-14496580 Lactuca sativa
Lsat_1_v5_gn_5_6601 10.0kb upstream 10.0kb upstream 22129   true Lsat_1_v8_lg_5: 14496581-14518709 Lactuca sativa
Lsat_1_v5_gn_5_6601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 14508710-14518709 Lactuca sativa
Lsat_1_v5_gn_5_6601 10.0kb downstream 10.0kb downstream 22129   true Lsat_1_v8_lg_5: 14486581-14508709 Lactuca sativa
Lsat_1_v5_gn_5_6601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 14486581-14496580 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471763 5263 Asterids View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain