Gene : Lsat_1_v5_gn_5_69960 L. sativa V8
Defline:  (1 of 9) K15601 - lysine-specific demethylase 3 [EC:1.14.11.-] (KDM3) Genomic Order:  1838
Name:  ? Lsat_1_v5_gn_5_69960 Secondary Identifier:  ? PAC:38965503
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_5_69960 0.5kb upstream 0.5kb upstream 8587   true Lsat_1_v8_lg_5: 160169789-160178375 Lactuca sativa
Lsat_1_v5_gn_5_69960 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_5: 160169789-160170288 Lactuca sativa
Lsat_1_v5_gn_5_69960 0.5kb downstream 0.5kb downstream 8587   true Lsat_1_v8_lg_5: 160170289-160178875 Lactuca sativa
Lsat_1_v5_gn_5_69960 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_5: 160178376-160178875 Lactuca sativa
Lsat_1_v5_gn_5_69960 1.0kb upstream 1.0kb upstream 9087   true Lsat_1_v8_lg_5: 160169289-160178375 Lactuca sativa
Lsat_1_v5_gn_5_69960 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_5: 160169289-160170288 Lactuca sativa
Lsat_1_v5_gn_5_69960 1.0kb downstream 1.0kb downstream 9087   true Lsat_1_v8_lg_5: 160170289-160179375 Lactuca sativa
Lsat_1_v5_gn_5_69960 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_5: 160178376-160179375 Lactuca sativa
Lsat_1_v5_gn_5_69960 2.0kb upstream 2.0kb upstream 10087   true Lsat_1_v8_lg_5: 160168289-160178375 Lactuca sativa
Lsat_1_v5_gn_5_69960 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_5: 160168289-160170288 Lactuca sativa
Lsat_1_v5_gn_5_69960 2.0kb downstream 2.0kb downstream 10087   true Lsat_1_v8_lg_5: 160170289-160180375 Lactuca sativa
Lsat_1_v5_gn_5_69960 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_5: 160178376-160180375 Lactuca sativa
Lsat_1_v5_gn_5_69960 5.0kb upstream 5.0kb upstream 13087   true Lsat_1_v8_lg_5: 160165289-160178375 Lactuca sativa
Lsat_1_v5_gn_5_69960 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_5: 160165289-160170288 Lactuca sativa
Lsat_1_v5_gn_5_69960 5.0kb downstream 5.0kb downstream 13087   true Lsat_1_v8_lg_5: 160170289-160183375 Lactuca sativa
Lsat_1_v5_gn_5_69960 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_5: 160178376-160183375 Lactuca sativa
Lsat_1_v5_gn_5_69960 10.0kb upstream 10.0kb upstream 18087   true Lsat_1_v8_lg_5: 160160289-160178375 Lactuca sativa
Lsat_1_v5_gn_5_69960 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_5: 160160289-160170288 Lactuca sativa
Lsat_1_v5_gn_5_69960 10.0kb downstream 10.0kb downstream 18087   true Lsat_1_v8_lg_5: 160170289-160188375 Lactuca sativa
Lsat_1_v5_gn_5_69960 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_5: 160178376-160188375 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480798 5263 Asterids View MSA
123747808 5271 Pentapetalae View MSA
122796242 5272 Eudicot View MSA
122050393 5273 Angiosperm View MSA
121349542 5274 Embryophyte View MSA
123425923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain